RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PIANPQ8IYJ0 282 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 CHPFQ8IZ52 775 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 PBXIP1Q96AQ6 731 aa20.74■□□□□ 0.91
PNKP-203ENST00000593946 INTS10Q9NVR2 710 aaKnown RBP20.74■□□□□ 0.91
PNKP-203ENST00000593946 FNDC3AQ9Y2H6 1198 aaKnown RBP20.74■□□□□ 0.91
PNKP-203ENST00000593946 PMLP29590 882 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 CRHR1P34998 444 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 CDKN1CP49918 316 aaPredicted RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 METAP1P53582 386 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 PTPN5P54829 565 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 LRRC14Q15048 493 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 PON2Q15165 354 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 TMEM196Q5HYL7 178 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 ARRDC3Q96B67 414 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 CABS1Q96KC9 395 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 SLC13A1Q9BZW2 595 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 MLXIPLQ9NP71 852 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 IL26Q9NPH9 171 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 APPL1Q9UKG1 709 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 CORO1CQ9ULV4 474 aaPredicted RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 SRP72O76094 671 aaKnown RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 ASMTLO95671 621 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 MPOP05164 745 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 C1SP09871 688 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 XPAP23025 273 aaPredicted RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 SPAM1P38567 509 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 MMP12P39900 470 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 CCT5P48643 541 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 SEC13P55735 322 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 POU4F1Q01851 419 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 CACNG1Q06432 222 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 GABPB1Q06547 395 aaPredicted RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 CAMK2GQ13555 558 aaPredicted RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 USP10Q14694 798 aaKnown RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 ZRANB3Q5FWF4 1079 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 PPM1JQ5JR12 505 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 RBM20Q5T481 1227 aaKnown RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 PTCRAQ6ISU1 281 aaPredicted RBP20.73■□□□□ 0.91
PNKP-203ENST00000593946 DPPA4Q7L190 304 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 SLC41A1Q8IVJ1 513 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 GPATCH11Q8N954 259 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 PPP1R16AQ96I34 528 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 OMDQ99983 421 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 SLC17A7Q9P2U7 560 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 SLC30A1Q9Y6M5 507 aa20.73■□□□□ 0.91
PNKP-203ENST00000593946 PIKFYVEQ9Y2I7 2098 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 PRAMEF1O95521 474 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 EGFP01133 1207 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 IL1BP01584 269 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 GLULP15104 373 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 LSP1P33241 339 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 TIE1P35590 1138 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 TTPAP49638 278 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 RALGDSQ12967 914 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 ARHGEF7Q14155 803 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 ZKSCAN8Q15776 578 aaPredicted RBP20.72■□□□□ 0.91
PNKP-203ENST00000593946 AARS2Q5JTZ9 985 aaKnown RBP20.72■□□□□ 0.91
PNKP-203ENST00000593946 IER5LQ5T953 404 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 FAM151BQ6UXP7 276 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 MMAAQ8IVH4 418 aaKnown RBP20.72■□□□□ 0.91
PNKP-203ENST00000593946 GPR26Q8NDV2 337 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 KCNV2Q8TDN2 545 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 LPGAT1Q92604 370 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 ELMO2Q96JJ3 720 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 C12orf65Q9H3J6 166 aaKnown RBP20.72■□□□□ 0.91
PNKP-203ENST00000593946 CRYL1Q9Y2S2 319 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 PLLPQ9Y342 182 aa20.72■□□□□ 0.91
PNKP-203ENST00000593946 A0A096LPK6 155 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 GLYATL1P3A0A0U1RQE8 302 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 C1QTNF3-AMACRE9PGA6 284 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 NARSO43776 548 aaKnown RBP20.71■□□□□ 0.91
PNKP-203ENST00000593946 TOP3BO95985 862 aaKnown RBP20.71■□□□□ 0.91
PNKP-203ENST00000593946 C2P06681 752 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 DRD1P21728 446 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 WASP42768 502 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 ETV4P43268 484 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 SPINT3P49223 89 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 PFKPQ01813 784 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 RNF187Q5TA31 235 aaPredicted RBP20.71■□□□□ 0.91
PNKP-203ENST00000593946 ZDHHC20Q5W0Z9 365 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 PLEKHG4BQ96PX9 1271 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 NDNQ99608 321 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 IQCGQ9H095 443 aaKnown RBP20.71■□□□□ 0.91
PNKP-203ENST00000593946 FAM96AQ9H5X1 160 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 CCDC134Q9H6E4 229 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 VPS9D1Q9Y2B5 631 aa20.71■□□□□ 0.91
PNKP-203ENST00000593946 GPR39O43194 453 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 SPINT1O43278 529 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 GLRA3O75311 464 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 SLC35E2BP0CK96 405 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 STMN1P16949 149 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 SUOXP51687 545 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 TAS2R39P59534 338 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 RAB10P61026 200 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 NFATC2Q13469 925 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 TERF2Q15554 542 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 ERAP2Q6P179 960 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 LVRNQ6Q4G3 990 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 SNX20Q7Z614 316 aa20.7■□□□□ 0.9
PNKP-203ENST00000593946 CLEC14AQ86T13 490 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms