RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 LRRC8BQ6P9F7 803 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 CAPN12Q6ZSI9 719 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 CCDC25Q86WR0 208 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 C1orf216Q8TAB5 229 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 CCHCR1Q8TD31 782 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 PPP1R16AQ96I34 528 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 DNAJC1Q96KC8 554 aaKnown RBP9.64□□□□□ -0.87
DDX39A-220ENST00000593008 SLC6A18Q96N87 628 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 AGAP2Q99490 1192 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 ORAI3Q9BRQ5 295 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 ABCG8Q9H221 673 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 IL21RQ9HBE5 538 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 TM9SF3Q9HD45 589 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 PHTF1Q9UMS5 762 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 LRRK1Q38SD2 2015 aa9.64□□□□□ -0.87
DDX39A-220ENST00000593008 A0A1W2PPC4 97 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 IGLON5A6NGN9 336 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 C10orf142B7Z368 130 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 K7ESM1 405 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 NEMP1O14524 444 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 PCDH8O95206 1070 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 CA4P22748 312 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 ELK3P41970 407 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 NOVA1P51513 510 aaKnown RBP9.63□□□□□ -0.87
DDX39A-220ENST00000593008 STC1P52823 247 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 PTSQ03393 145 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 CDH17Q12864 832 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 PDIA2Q13087 525 aaKnown RBP9.63□□□□□ -0.87
DDX39A-220ENST00000593008 CALCOCO2Q13137 446 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 HLTFQ14527 1009 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX39A-220ENST00000593008 GRM3Q14832 879 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 KIF19Q2TAC6 998 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 GLE1Q53GS7 698 aaKnown RBP9.63□□□□□ -0.87
DDX39A-220ENST00000593008 ERAP2Q6P179 960 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 LIPIQ6XZB0 460 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 USP45Q70EL2 814 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 GLT6D1Q7Z4J2 308 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 HOOK3Q86VS8 718 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 MCUQ8NE86 351 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 DEFB124Q8NES8 71 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SCAMP4Q969E2 229 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 ZBTB9Q96C00 473 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SCRN2Q96FV2 425 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 CFAP36Q96G28 342 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SERAC1Q96JX3 654 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SIGLEC10Q96LC7 697 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 FCRL3Q96P31 734 aaPredicted RBP9.63□□□□□ -0.87
DDX39A-220ENST00000593008 ADGRE3Q9BY15 652 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 FAM96AQ9H5X1 160 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SUDS3Q9H7L9 328 aaPredicted RBP9.63□□□□□ -0.87
DDX39A-220ENST00000593008 ARNT2Q9HBZ2 717 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SAYSD1Q9NPB0 183 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 CHRAC1Q9NRG0 131 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 AASDHPPTQ9NRN7 309 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX39A-220ENST00000593008 FKBPLQ9UIM3 349 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 PPIL1Q9Y3C6 166 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 TCAF1Q9Y4C2 921 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 SNX11Q9Y5W9 270 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 DOCK9Q9BZ29 2069 aa9.63□□□□□ -0.87
DDX39A-220ENST00000593008 CNOT1A5YKK6 2376 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GOLGA6BA6NDN3 693 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ERI2A8K979 691 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GOLGA8KD6RF30 607 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GOLGA8TH3BQL2 631 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GAPDHSO14556 408 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 SLC7A4O43246 635 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 KCNK5O95279 499 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 EPOP01588 193 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ELFN1P0C7U0 828 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 BPIP17213 487 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 NFKBIAP25963 317 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ARNTP27540 789 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 CCR5P51681 352 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 RPL26P61254 145 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ACOX1Q15067 660 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 TEAD4Q15561 434 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 HIF1AQ16665 826 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ZNF284Q2VY69 593 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 HLA-BQ31612 363 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 TMEM52BQ4KMG9 183 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 TMEM259Q4ZIN3 620 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 PRAMEF14Q5SWL7 426 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 TPRG1LQ5T0D9 272 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ZNF648Q5T619 568 aaPredicted RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 KCTD16Q68DU8 428 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ESRP1Q6NXG1 681 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 CASC4Q6P4E1 433 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 TRMT10BQ6PF06 316 aaKnown RBP9.62□□□□□ -0.87
DDX39A-220ENST00000593008 C4orf22Q6V702 233 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 Q6ZVL8 140 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 PLA2G15Q8NCC3 412 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 GPR26Q8NDV2 337 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 OR4K2Q8NGD2 314 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 OR13J1Q8NGT2 312 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 UBXN4Q92575 508 aa9.62□□□□□ -0.87
DDX39A-220ENST00000593008 ZNF669Q96BR6 464 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms