RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	CLEC18B	Q6UXF7	455 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	APTX	Q7Z2E3	356 aa	Known RBP	18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	IRF2BP2	Q7Z5L9	587 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	CLEC18C	Q8NCF0	446 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	FNIP1	Q8TF40	1166 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	SMIM14	Q96QK8	99 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	NUDCD1	Q96RS6	583 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	MGME1	Q9BQP7	344 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	KCNK4	Q9NYG8	393 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	LIMA1	Q9UHB6	759 aa	Known RBP	18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	TMEM98	Q9Y2Y6	226 aa		18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	18.21	■□□□□ 0.51
CIRBP-238	ENST00000592412	TMEM191C	A6NGB0	347 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	EFCAB7	A8K855	629 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	PSMD11	O00231	422 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	NKX2-8	O15522	239 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	FASLG	P48023	281 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	HCAR3	P49019	387 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	MAX	P61244	160 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	DPT	Q07507	201 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	ZNF235	Q14590	738 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	IGFBP7	Q16270	282 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	TMEM71	Q6P5X7	295 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	TIPARP	Q7Z3E1	657 aa	Known RBP	18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	TRIM74	Q86UV6	250 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	SLC37A2	Q8TED4	501 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	RTP4	Q96DX8	246 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	SCRN2	Q96FV2	425 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	SLC45A3	Q96JT2	553 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	ERGIC2	Q96RQ1	377 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	ASPSCR1	Q9BZE9	553 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	KCTD5	Q9NXV2	234 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	CD84	Q9UIB8	345 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	PHTF1	Q9UMS5	762 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	PPIL1	Q9Y3C6	166 aa		18.2	■□□□□ 0.5
CIRBP-238	ENST00000592412	LOC101059948	A0A1B0GTJ6	334 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	GOLGA6C	A6NDK9	693 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	GOLGA6B	A6NDN3	693 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	TMCO5B	A8MYB1	307 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	ZW10	O43264	779 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	MAFK	O60675	156 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	LRCH4	O75427	683 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	PGLS	O95336	258 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	GOLGA6D	P0CG33	693 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	CASR	P41180	1078 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	CCR10	P46092	362 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	GPLD1	P80108	840 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	UBAP2L	Q14157	1087 aa	Known RBP	18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	PYCR3	Q53H96	274 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	ADAMTSL4	Q6UY14	1074 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	FAM129C	Q86XR2	697 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	SFRP1	Q8N474	314 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	CCDC112	Q8NEF3	446 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	PIH1D2	Q8WWB5	315 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	SCAMP4	Q969E2	229 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	PCMTD1	Q96MG8	357 aa	Predicted RBP	18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	OR2M4	Q96R27	311 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	AGAP2	Q99490	1192 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	CTRC	Q99895	268 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	ABCG8	Q9H221	673 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	PARVA	Q9NVD7	372 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	GOLGA6A	Q9NYA3	693 aa		18.19	■□□□□ 0.5
CIRBP-238	ENST00000592412	UNC79	Q9P2D8	2635 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	TRBV23OR9-2	A0A075B6M9	112 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412		A0A1W2PQ67	120 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	ZNF891	A8MT65	544 aa	Predicted RBP	18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	TPM2	P07951	284 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	PDHA1	P08559	390 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	CYP2A6	P11509	494 aa	Predicted RBP	18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	TCF4	P15884	667 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	CTPS1	P17812	591 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	IL1R2	P27930	398 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	BIRC2	Q13490	618 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	IHH	Q14623	411 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	DCAF12	Q5T6F0	453 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	ARHGAP22	Q7Z5H3	698 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	PSTK	Q8IV42	348 aa	Known RBP	18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	UNC5B	Q8IZJ1	945 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	LZTR1	Q8N653	840 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	DPYSL5	Q9BPU6	564 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	HSD3B7	Q9H2F3	369 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	APMAP	Q9HDC9	416 aa		18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	ZNF71	Q9NQZ8	489 aa	Predicted RBP	18.18	■□□□□ 0.5
CIRBP-238	ENST00000592412	LRRC10B	A6NIK2	292 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	PRPSAP2	O60256	369 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	FZD6	O60353	706 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	MAP3K6	O95382	1288 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	FER	P16591	822 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	DES	P17661	470 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	AMPD1	P23109	780 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	OAS2	P29728	719 aa	Known RBP	18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	HSPA9	P38646	679 aa	Known RBP	18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	GPR1	P46091	355 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	RAB15	P59190	212 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	MC2R	Q01718	297 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	UBXN1	Q04323	297 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	DPYSL2	Q16555	572 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	LRRC66	Q68CR7	880 aa		18.17	■□□□□ 0.5
CIRBP-238	ENST00000592412	MARK2	Q7KZI7	788 aa	Known RBP	18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms