RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 UGT3A1Q6NUS8 523 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 CDHR3Q6ZTQ4 885 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 RAB44Q7Z6P3 723 aaPredicted RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 CAMK1DQ8IU85 385 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 STK40Q8N2I9 435 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 AFAP1L2Q8N4X5 818 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 KIAA1958Q8N8K9 716 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 OR2AP1Q8NGE2 309 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 OR13C4Q8NGS5 318 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 OR13J1Q8NGT2 312 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 WFIKKN2Q8TEU8 576 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 CCDC126Q96EE4 140 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 ALG14Q96F25 216 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 MSANTD3Q96H12 275 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 RPL10LQ96L21 214 aaKnown RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 RILPQ96NA2 401 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 LRRC37BQ96QE4 947 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 MRPL57Q9BQC6 102 aaKnown RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 TUBB6Q9BUF5 446 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 RPP25Q9BUL9 199 aaKnown RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 MECRQ9BV79 373 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 OSBPL6Q9BZF3 934 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 CEP44Q9C0F1 390 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 TNKS2Q9H2K2 1166 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 LINC00597Q9H2U6 94 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 SUDS3Q9H7L9 328 aaPredicted RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 SYTL2Q9HCH5 934 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 SLCO1B3Q9NPD5 702 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 TRPV5Q9NQA5 729 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 INTS10Q9NVR2 710 aaKnown RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 COPG2Q9UBF2 871 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 RAPGEFL1Q9UHV5 662 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 DCTN4Q9UJW0 460 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 CRYL1Q9Y2S2 319 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 WNT6Q9Y6F9 365 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 C1orf232A0A0U1RR37 186 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 KANSL1LA0AUZ9 987 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 KRBA1A5PL33 1030 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 OR51F1A6NGY5 319 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 HEPACAM2A8MVW5 462 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 TMEM114B3SHH9 223 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 E5RI56 91 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 CCL22O00626 93 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 SMIM24O75264 130 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 MOSPD3O75425 235 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 VPS26AO75436 327 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ATP5HO75947 161 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 RHOBTB1O94844 696 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 S1PR4O95977 384 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 PENKP01210 267 aaPredicted RBP9.27□□□□□ -0.93
SS18-220ENST00000582092 IL1BP01584 269 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 PDHA1P08559 390 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 F7P08709 466 aaPredicted RBP9.27□□□□□ -0.93
SS18-220ENST00000582092 KITP10721 976 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ADH5P11766 374 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 SRCP12931 536 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 GLULP15104 373 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ARNTP27540 789 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 FMO4P31512 558 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 MC4RP32245 332 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 MAGEA12P43365 314 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 GLRBP48167 497 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 DGKGP49619 791 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 RASSF2P50749 326 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ARSDP51689 593 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ACVR1Q04771 509 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 USP4Q13107 963 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 CSHL1Q14406 222 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 UBXN2BQ14CS0 331 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 DLG2Q15700 870 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ZNF77Q15935 545 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 PREPLQ4J6C6 727 aaPredicted RBP9.27□□□□□ -0.93
SS18-220ENST00000582092 LYPLAL1Q5VWZ2 237 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 GRAMD4Q6IC98 578 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 LRRC8EQ6NSJ5 796 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 C22orf39Q6P5X5 142 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 C6orf89Q6UWU4 347 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ZNF852Q6ZMS4 543 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 NUDT18Q6ZVK8 323 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 USP45Q70EL2 814 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 C10orf107Q8IVU9 208 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ADGRG2Q8IZP9 1017 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ST13P5Q8NFI4 369 aaPredicted RBP9.27□□□□□ -0.93
SS18-220ENST00000582092 OR6K2Q8NGY2 324 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 BPIFB1Q8TDL5 484 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 KCTD4Q8WVF5 259 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ATOH1Q92858 354 aaPredicted RBP9.27□□□□□ -0.93
SS18-220ENST00000582092 C7orf26Q96N11 449 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ZNF641Q96N77 438 aaPredicted RBP9.27□□□□□ -0.93
SS18-220ENST00000582092 NDNQ99608 321 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 OMDQ99983 421 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 SIKE1Q9BRV8 207 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 CIPCQ9C0C6 399 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 WWP1Q9H0M0 922 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 SUV39H2Q9H5I1 410 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ZDHHC6Q9H6R6 413 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 ZFYVE1Q9HBF4 777 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 BPIFA1Q9NP55 256 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 TAS2R13Q9NYV9 303 aa9.27□□□□□ -0.93
SS18-220ENST00000582092 SIRPGQ9P1W8 387 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms