RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TTC7BQ86TV6 843 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 KCNV2Q8TDN2 545 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 MSANTD3Q96H12 275 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 ELMO2Q96JJ3 720 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 FAM129BQ96TA1 746 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 CCDC134Q9H6E4 229 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 SARDHQ9UL12 918 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 XIRP2A4UGR9 3374 aa18.51■□□□□ 0.55
PRKCA-203ENST00000578063 A0A096LPK6 155 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 SRRM3A6NNA2 597 aaPredicted RBP18.5■□□□□ 0.55
PRKCA-203ENST00000578063 A8MX80 341 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 SRP72O76094 671 aaKnown RBP18.5■□□□□ 0.55
PRKCA-203ENST00000578063 PRAMEF1O95521 474 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 ASMTLO95671 621 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 STMN1P16949 149 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 ITGALP20701 1170 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 CRABP2P29373 138 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 CSRP3P50461 194 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 SLC12A2P55011 1212 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 WDR4P57081 412 aaKnown RBP18.5■□□□□ 0.55
PRKCA-203ENST00000578063 RAB10P61026 200 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 IL9RQ01113 521 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 PTSQ03393 145 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 ZKSCAN8Q15776 578 aaPredicted RBP18.5■□□□□ 0.55
PRKCA-203ENST00000578063 INSCQ1MX18 579 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 TAF1BQ53T94 588 aaPredicted RBP18.5■□□□□ 0.55
PRKCA-203ENST00000578063 ZNF789Q5FWF6 425 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 LRRC73Q5JTD7 316 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 DPPA4Q7L190 304 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 ACVR1CQ8NER5 493 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 TSPAN17Q96FV3 270 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 VPS11Q9H270 941 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 CAB39LQ9H9S4 337 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 MLXIPLQ9NP71 852 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 DYRK4Q9NR20 520 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 PKD2L2Q9NZM6 624 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 DCDC2Q9UHG0 476 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 FAM50BQ9Y247 325 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 ANKRD6Q9Y2G4 727 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 FNDC3AQ9Y2H6 1198 aaKnown RBP18.5■□□□□ 0.55
PRKCA-203ENST00000578063 PLLPQ9Y342 182 aa18.5■□□□□ 0.55
PRKCA-203ENST00000578063 GLYATL1P3A0A0U1RQE8 302 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 NDUFS3O75489 264 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 IL1BP01584 269 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 GSTA1P08263 222 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 C1SP09871 688 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 CHRM1P11229 460 aaPredicted RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 GLULP15104 373 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 DRD1P21728 446 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 PPARGP37231 505 aaPredicted RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 MMP12P39900 470 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 TERF2Q15554 542 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 POM121L1PQ3SYA9 428 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 TMEM196Q5HYL7 178 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 HHATQ5VTY9 493 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 FAM46CQ5VWP2 391 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 FAM45BPQ6NSW5 357 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 PSAPL1Q6NUJ1 521 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 LVRNQ6Q4G3 990 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 FAM151BQ6UXP7 276 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 CERS6Q6ZMG9 384 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 CDHR3Q6ZTQ4 885 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 RAPH1Q70E73 1250 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 SNX20Q7Z614 316 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 TAX1BP1Q86VP1 789 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 LCA5Q86VQ0 697 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 SLC41A1Q8IVJ1 513 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 FAM45AQ8TCE6 357 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 EZH1Q92800 747 aaPredicted RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 PLEKHG4BQ96PX9 1271 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 OMDQ99983 421 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 ZDHHC4Q9NPG8 344 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 IL26Q9NPH9 171 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 HEBP1Q9NRV9 189 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 RAD18Q9NS91 495 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 TLK1Q9UKI8 766 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 GRID1Q9ULK0 1009 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 C2P06681 752 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 PRSS56P0CW18 603 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 SAT1P21673 171 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 SEMG2Q02383 582 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 GRSF1Q12849 480 aaKnown RBP eCLIP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 CAMK2GQ13555 558 aaPredicted RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 PUS10Q3MIT2 529 aaKnown RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 GPR33Q49SQ1 333 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 RBM20Q5T481 1227 aaKnown RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 KYAT3Q6YP21 454 aaKnown RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 CCDC91Q7Z6B0 441 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 PIANPQ8IYJ0 282 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 LPGAT1Q92604 370 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 ARRDC3Q96B67 414 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 FAM111AQ96PZ2 611 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 TTC1Q99614 292 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.49■□□□□ 0.55
PRKCA-203ENST00000578063 SLC17A7Q9P2U7 560 aa18.49■□□□□ 0.55
PRKCA-203ENST00000578063 GAPDHSO14556 408 aaPredicted RBP18.48■□□□□ 0.55
PRKCA-203ENST00000578063 ASGR2P07307 311 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 TIE1P35590 1138 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 ETV4P43268 484 aa18.48■□□□□ 0.55
PRKCA-203ENST00000578063 SPINT3P49223 89 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms