RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 OR10G6Q8NH81 332 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 SCARF2Q96GP6 870 aaPredicted RBP18.92■□□□□ 0.62
SCARF1-204ENST00000570902 NSMCE3Q96MG7 304 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 OR2M4Q96R27 311 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 NUDCD1Q96RS6 583 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 SLC38A3Q99624 504 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 ZPBPQ9BS86 351 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 SNRNP25Q9BV90 132 aaKnown RBP18.92■□□□□ 0.62
SCARF1-204ENST00000570902 PARVAQ9NVD7 372 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 TMEM9Q9P0T7 183 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 PDP2Q9P2J9 529 aa18.92■□□□□ 0.62
SCARF1-204ENST00000570902 DOPEY2Q9Y3R5 2298 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 CCDC172P0C7W6 258 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 LHCGRP22888 699 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 GPR1P46091 355 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 HCAR3P49019 387 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 SLC10A7Q0GE19 358 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 PPP6R3Q5H9R7 873 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-204ENST00000570902 DOK6Q6PKX4 331 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 CEACAM20Q6UY09 585 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 BBS5Q8N3I7 341 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 BMPERQ8N8U9 685 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 PTCD2Q8WV60 388 aaKnown RBP18.91■□□□□ 0.62
SCARF1-204ENST00000570902 RTP4Q96DX8 246 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 SCRN2Q96FV2 425 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 KCTD15Q96SI1 283 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-204ENST00000570902 PCSK1NQ9UHG2 260 aa18.91■□□□□ 0.62
SCARF1-204ENST00000570902 RELNP78509 3460 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 ZFC3H1O60293 1989 aaKnown RBP18.9■□□□□ 0.62
SCARF1-204ENST00000570902 NKX2-8O15522 239 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 PRPSAP2O60256 369 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 RNF8O76064 485 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 CR2P20023 1033 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 MC1RQ01726 317 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 CDC20Q12834 499 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 MAMLD1Q13495 774 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 LRP8Q14114 963 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 NCAPHQ15003 741 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 IGFBP7Q16270 282 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 RALGPS1Q5JS13 557 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 WDR74Q6RFH5 385 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-204ENST00000570902 Q6ZVL8 140 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 USP45Q70EL2 814 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 TRIT1Q9H3H1 467 aaKnown RBP18.9■□□□□ 0.62
SCARF1-204ENST00000570902 ZWILCHQ9H900 591 aa18.9■□□□□ 0.62
SCARF1-204ENST00000570902 ZNF71Q9NQZ8 489 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-204ENST00000570902 TTC24A2A3L6 582 aaPredicted RBP18.89■□□□□ 0.61
SCARF1-204ENST00000570902 CLEC18AA5D8T8 446 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 NPIPB15A6NHN6 443 aaPredicted RBP18.89■□□□□ 0.61
SCARF1-204ENST00000570902 MBD3O95983 291 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 PYGLP06737 847 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 PRKAR1AP10644 381 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 NOP2P46087 812 aaKnown RBP18.89■□□□□ 0.61
SCARF1-204ENST00000570902 MC2RQ01718 297 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 ABHD18Q0P651 414 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 SEPT6Q14141 434 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 SASS6Q6UVJ0 657 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 CLEC18BQ6UXF7 455 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 ADAMTSL4Q6UY14 1074 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 RBM43Q6ZSC3 357 aaKnown RBP18.89■□□□□ 0.61
SCARF1-204ENST00000570902 GALNT13Q8IUC8 556 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 CLEC18CQ8NCF0 446 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 ANKRD20A12PQ8NF67 263 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 APOBEC4Q8WW27 367 aaKnown RBP18.89■□□□□ 0.61
SCARF1-204ENST00000570902 MCCC1Q96RQ3 725 aaPredicted RBP18.89■□□□□ 0.61
SCARF1-204ENST00000570902 PEBP4Q96S96 227 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 MGME1Q9BQP7 344 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 SPRY4Q9C004 299 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 STN1Q9H668 368 aaKnown RBP18.89■□□□□ 0.61
SCARF1-204ENST00000570902 NOD2Q9HC29 1040 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 FBXO8Q9NRD0 319 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 PLEKHM1Q9Y4G2 1056 aa18.89■□□□□ 0.61
SCARF1-204ENST00000570902 PGLSO95336 258 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 TRAF2Q12933 501 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 DPYSQ14117 519 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 CRTC2Q53ET0 693 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-204ENST00000570902 PYCR3Q53H96 274 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 SNAP47Q5SQN1 464 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 ARMC12Q5T9G4 340 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 KDELC2Q7Z4H8 507 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 TECPR1Q7Z6L1 1165 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 TSPAN33Q86UF1 283 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 LURAP1LQ8IV03 231 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 NDUFAF2Q8N183 169 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 SFRP1Q8N474 314 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 ARFGAP1Q8N6T3 406 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 SLC37A2Q8TED4 501 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 NSMCE1Q8WV22 266 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 AP2M1Q96CW1 435 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 CWC15Q9P013 229 aaKnown RBP18.88■□□□□ 0.61
SCARF1-204ENST00000570902 TMEM98Q9Y2Y6 226 aa18.88■□□□□ 0.61
SCARF1-204ENST00000570902 LOC101059948A0A1B0GTJ6 334 aa18.87■□□□□ 0.61
SCARF1-204ENST00000570902 A8MU76 341 aa18.87■□□□□ 0.61
SCARF1-204ENST00000570902 FERP16591 822 aa18.87■□□□□ 0.61
SCARF1-204ENST00000570902 MIPP30301 263 aa18.87■□□□□ 0.61
SCARF1-204ENST00000570902 LACTB2Q53H82 288 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-204ENST00000570902 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-204ENST00000570902 CCDC183Q5T5S1 534 aa18.87■□□□□ 0.61
SCARF1-204ENST00000570902 PLEKHA7Q6IQ23 1121 aa18.87■□□□□ 0.61
SCARF1-204ENST00000570902 ARHGAP22Q7Z5H3 698 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms