RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 SIM2Q14190 667 aaPredicted RBP12.72□□□□□ -0.37
CFDP1-205ENST00000565646 AGERQ15109 404 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 BBS9Q3SYG4 887 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 PCID2Q5JVF3 399 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 TSTD2Q5T7W7 516 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 IFT20Q8IY31 132 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 PELI3Q8N2H9 469 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 GPR26Q8NDV2 337 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 CADM4Q8NFZ8 388 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 OR4K2Q8NGD2 314 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 NETO1Q8TDF5 533 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 ASB12Q8WXK4 309 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 UBXN4Q92575 508 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 DTD2Q96FN9 168 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 DNAJC1Q96KC8 554 aaKnown RBP12.72□□□□□ -0.37
CFDP1-205ENST00000565646 SLC17A9Q9BYT1 436 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 DUSP15Q9H1R2 295 aaPredicted RBP12.72□□□□□ -0.37
CFDP1-205ENST00000565646 PLAC1Q9HBJ0 212 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 BPIFA1Q9NP55 256 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 CHRAC1Q9NRG0 131 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 SEMA4GQ9NTN9 838 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 SLC2A6Q9UGQ3 507 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 RIMKLBQ9ULI2 386 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 NFU1Q9UMS0 254 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 SOX13Q9UN79 622 aa12.72□□□□□ -0.37
CFDP1-205ENST00000565646 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.72□□□□□ -0.37
CFDP1-205ENST00000565646 PIKFYVEQ9Y2I7 2098 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 CCL22O00626 93 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 WNT9AO14904 365 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 LRP3O75074 770 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 FSBPO95073 299 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 CRTAMO95727 393 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 PAK4O96013 591 aaPredicted RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 NMBRP28336 390 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 TNFRSF8P28908 595 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 VSNL1P62760 191 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 ACVR1Q04771 509 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 PDIA2Q13087 525 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 HLTFQ14527 1009 aaKnown RBP eCLIP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 ACOX1Q15067 660 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 WSCD2Q2TBF2 565 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 PLK5Q496M5 336 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 DNAJC21Q5F1R6 531 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 HP1BP3Q5SSJ5 553 aaPredicted RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 ARMC3Q5W041 872 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 ESRP1Q6NXG1 681 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 CES3Q6UWW8 571 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 CYP2U1Q7Z449 544 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 RAVER1Q8IY67 606 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 TMEFF1Q8IYR6 380 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 EIF1ADQ8N9N8 165 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 PPHLN1Q8NEY8 458 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 OR13J1Q8NGT2 312 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 STYXQ8WUJ0 223 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 PTCD2Q8WV60 388 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 SCAMP4Q969E2 229 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 CENPTQ96BT3 561 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 LRRC39Q96DD0 335 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 HSPA12BQ96MM6 686 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 FCRL3Q96P31 734 aaPredicted RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 KLF6Q99612 283 aaPredicted RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 EBNA1BP2Q99848 306 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 C19orf43Q9BQ61 176 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 PHACTR1Q9C0D0 580 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 ABCG8Q9H221 673 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 MRM3Q9HC36 420 aaKnown RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 TREX1Q9NSU2 369 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 NLE1Q9NVX2 485 aaPredicted RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 NFKBIL1Q9UBC1 381 aaPredicted RBP12.71□□□□□ -0.37
CFDP1-205ENST00000565646 SLCO1B1Q9Y6L6 691 aa12.71□□□□□ -0.37
CFDP1-205ENST00000565646 CNOT1A5YKK6 2376 aaKnown RBP12.7□□□□□ -0.38
CFDP1-205ENST00000565646 FAM237BA0A1B0GVD1 139 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 C2orf81A6NN90 581 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 K7ESM1 405 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 EIF3HO15372 352 aaKnown RBP eCLIP12.7□□□□□ -0.38
CFDP1-205ENST00000565646 STX7O15400 261 aaKnown RBP12.7□□□□□ -0.38
CFDP1-205ENST00000565646 SLC31A1O15431 190 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 LZTS3O60299 673 aaPredicted RBP12.7□□□□□ -0.38
CFDP1-205ENST00000565646 SOD1P00441 154 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 FAM153BP0C7A2 387 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 KCNA4P22459 653 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 ARNTP27540 789 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 CNR2P34972 360 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 ELK3P41970 407 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 PTGER3P43115 390 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 DCDC1P59894 354 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 XIAPP98170 497 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 PDE1BQ01064 536 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 CSRP2Q16527 193 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 FAM153CQ494X1 144 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 ANKRD20A4Q4UJ75 823 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 HENMT1Q5T8I9 393 aaKnown RBP12.7□□□□□ -0.38
CFDP1-205ENST00000565646 PMS2CLQ68D20 193 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 CASC4Q6P4E1 433 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 KDM7AQ6ZMT4 941 aa12.7□□□□□ -0.38
CFDP1-205ENST00000565646 PRR23CQ6ZRP0 262 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms