RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 NFATC3Q12968 1075 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 DOK6Q6PKX4 331 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 PRICKLE2Q7Z3G6 844 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 NDUFAF2Q8N183 169 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 TEX26Q8N6G2 289 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 PIH1D2Q8WWB5 315 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 SCARF2Q96GP6 870 aaPredicted RBP17.34■□□□□ 0.37
CRTC3-208ENST00000560098 CCDC74BQ96LY2 380 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 NAP1L5Q96NT1 182 aaPredicted RBP17.34■□□□□ 0.37
CRTC3-208ENST00000560098 FAM117AQ9C073 453 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 CDH19Q9H159 772 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 NT5MQ9NPB1 228 aa17.34■□□□□ 0.37
CRTC3-208ENST00000560098 A0A0U1RQS6 177 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 A0A1B0GTH6 734 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 STMND1H3BQB6 276 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 PPM1DO15297 605 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 FZD6O60353 706 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 SOD1P00441 154 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 PDHA1P08559 390 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 ACTR1BP42025 376 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 LIMK2P53671 638 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 ACTR1AP61163 376 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 SLC25A11Q02978 314 aaKnown RBP17.33■□□□□ 0.36
CRTC3-208ENST00000560098 TRA2AQ13595 282 aaKnown RBP eCLIP17.33■□□□□ 0.36
CRTC3-208ENST00000560098 LRRC66Q68CR7 880 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 ADAMTSL4Q6UY14 1074 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 RFLNAQ6ZTI6 216 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 LRRC49Q8IUZ0 686 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 NIPA2Q8N8Q9 360 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 OR4D9Q8NGE8 314 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 AP2M1Q96CW1 435 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 OR2M4Q96R27 311 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 SEMA3CQ99985 751 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 ABCG8Q9H221 673 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 CLMPQ9H6B4 373 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 CD84Q9UIB8 345 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 PLEKHM1Q9Y4G2 1056 aa17.33■□□□□ 0.36
CRTC3-208ENST00000560098 HEMK1Q9Y5R4 338 aaPredicted RBP17.33■□□□□ 0.36
CRTC3-208ENST00000560098 FGF3P11487 239 aaPredicted RBP17.32■□□□□ 0.36
CRTC3-208ENST00000560098 WT1P19544 449 aaPredicted RBP17.32■□□□□ 0.36
CRTC3-208ENST00000560098 KCNC4Q03721 635 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 ITKQ08881 620 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 SQSTM1Q13501 440 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 NKAIN2Q5VXU1 208 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 NLRP8Q86W28 1048 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 TAAR9Q96RI9 348 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 POLR1EQ9GZS1 481 aaKnown RBP17.32■□□□□ 0.36
CRTC3-208ENST00000560098 THAP2Q9H0W7 228 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 TMEM63CQ9P1W3 806 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 RCOR3Q9P2K3 495 aaPredicted RBP17.32■□□□□ 0.36
CRTC3-208ENST00000560098 IP6K2Q9UHH9 426 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 ANAPC7Q9UJX3 599 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 TMEM98Q9Y2Y6 226 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 PCDHGA3Q9Y5H0 932 aa17.32■□□□□ 0.36
CRTC3-208ENST00000560098 ARHGEF17Q96PE2 2063 aaPredicted RBP17.32■□□□□ 0.36
CRTC3-208ENST00000560098 IGHV1OR21-1A0A087WYE8 117 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 WISP1O95388 367 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 PYGLP06737 847 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 FAM87AP0C7U9 286 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 SFTPCP11686 197 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 ZNF30P17039 623 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 IL4RP24394 825 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 PTSQ03393 145 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 KRT81Q14533 505 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 NR1I3Q14994 352 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 TBR1Q16650 682 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 TDRD12Q587J7 1177 aaKnown RBP17.31■□□□□ 0.36
CRTC3-208ENST00000560098 FIGNQ5HY92 759 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 ZNF765Q7L2R6 523 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 TRIM74Q86UV6 250 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 AGBL5Q8NDL9 886 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 JPH3Q8WXH2 748 aaPredicted RBP17.31■□□□□ 0.36
CRTC3-208ENST00000560098 SCAMP4Q969E2 229 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 BTBD6Q96KE9 485 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 SMIM14Q96QK8 99 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 DPYSL5Q9BPU6 564 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 STARD5Q9NSY2 213 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 KCNK4Q9NYG8 393 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 BSNQ9UPA5 3926 aa17.31■□□□□ 0.36
CRTC3-208ENST00000560098 MYO18BQ8IUG5 2567 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 A0A0J9YYE9 177 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 TRBC1P01850 177 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 THRAP10827 490 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 ITGB6P18564 788 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 CSF2RBP32927 897 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 CSTF2P33240 577 aaKnown RBP eCLIP17.3■□□□□ 0.36
CRTC3-208ENST00000560098 ARSDP51689 593 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 CYP4F2P78329 520 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 GPLD1P80108 840 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 MMRN1Q13201 1228 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 LRP8Q14114 963 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 PYCR3Q53H96 274 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 HGSNATQ68CP4 663 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 MARK2Q7KZI7 788 aaKnown RBP17.3■□□□□ 0.36
CRTC3-208ENST00000560098 GALNT13Q8IUC8 556 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 CCDC112Q8NEF3 446 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 HTR3CQ8WXA8 447 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 PMEPA1Q969W9 287 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 NUP85Q9BW27 656 aa17.3■□□□□ 0.36
CRTC3-208ENST00000560098 BZW2Q9Y6E2 419 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms