RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZNF813Q6ZN06 617 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PQLC2Q6ZP29 291 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 RAPH1Q70E73 1250 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ERN2Q76MJ5 926 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 DPPA4Q7L190 304 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TAOK1Q7L7X3 1001 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 LINGO2Q7L985 606 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MFN1Q8IWA4 741 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 WDR63Q8IWG1 891 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 UNC45BQ8IWX7 931 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 KLHL7Q8IXQ5 586 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MB21D2Q8IYB1 491 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MMP21Q8N119 569 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CCAR2Q8N163 923 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 GUF1Q8N442 669 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 FBXO39Q8N4B4 442 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 AFAP1Q8N556 730 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TC2NQ8N9U0 490 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 IQUBQ8NA54 791 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CAMKVQ8NCB2 501 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MCPH1Q8NEM0 835 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TSPAN14Q8NG11 270 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CFAP61Q8NHU2 1237 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 BCAS4Q8TDM0 211 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PTPMT1Q8WUK0 201 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 IGSF8Q969P0 613 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ERGIC1Q969X5 290 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 EME1Q96AY2 570 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TMEM18Q96B42 140 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 SARAFQ96BY9 339 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ERLEC1Q96DZ1 483 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CFAP57Q96MR6 1250 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CCDC43Q96MW1 224 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF558Q96NG5 402 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 SLITRK1Q96PX8 696 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 GFM1Q96RP9 751 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ACOX2Q99424 681 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 DDOQ99489 341 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TIMP4Q99727 224 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 FAM110AQ9BQ89 295 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 NUP85Q9BW27 656 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MRPL9Q9BYD2 267 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 NPFFR1Q9GZQ6 430 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MMP27Q9H306 513 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 MMADHCQ9H3L0 296 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 TOR3AQ9H497 397 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 COPS7BQ9H9Q2 264 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 DBNDD1Q9H9R9 158 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 HINT3Q9NQE9 182 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 CWC25Q9NXE8 425 aaPredicted RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ANKRD10Q9NXR5 420 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 HAO2Q9NYQ3 351 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 OR14J1Q9UGF5 321 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 SERGEFQ9UGK8 458 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 DDX25Q9UHL0 483 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 OSGIN1Q9UJX0 560 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 ISY1Q9ULR0 285 aaKnown RBP2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PAM16Q9Y3D7 125 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 PCDHGA5Q9Y5G8 931 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 COL4A3Q01955 1670 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 WDR17Q8IZU2 1322 aa2.33□□□□□ -2.04
GABPB1-209ENST00000559100 A0A0B4J293 547 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 KIR2DS5A0A0G2JLQ3 304 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 A0A0U1RQK1 487 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 A0A1B0GVM2 712 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF320A2RRD8 509 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 H0YAE9 185 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 KIR2DS3K7RE56 304 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SLC16A5O15375 505 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PLRG1O43660 514 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 NARSO43776 548 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 KLK8O60259 260 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 DAB1O75553 588 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 NDUFB4O95168 129 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 KCNK5O95279 499 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CLDN7O95471 211 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CYC1P08574 325 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 MYZAPP0CAP1 466 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 G6PDP11413 515 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CD58P19256 250 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 WT1P19544 449 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 AGAP20933 346 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 UBA1P22314 1058 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 MYF6P23409 242 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PIGAP37287 484 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 EIF2S3P41091 472 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PPP3CCP48454 512 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 BMXP51813 675 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 POLGP54098 1239 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 CDH13P55290 713 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 RPS13P62277 151 aaKnown RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 YWHAHQ04917 246 aaPredicted RBP2.32□□□□□ -2.04
GABPB1-209ENST00000559100 FAM27E3Q08E93 113 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SREBF2Q12772 1141 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PTK6Q13882 451 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 E2F5Q15329 346 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 ZNF674Q2M3X9 581 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 C2orf68Q2NKX9 166 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 PROSER3Q2NL68 480 aa2.32□□□□□ -2.04
GABPB1-209ENST00000559100 SMTNL2Q2TAL5 461 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms