RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ARHGEF26Q96DR7 871 aa4.54□□□□□ -1.68
SCFD1-221ENST00000556534 TMEM19Q96HH6 336 aa4.54□□□□□ -1.68
SCFD1-221ENST00000556534 GRAMD2BQ96HH9 432 aa4.54□□□□□ -1.68
SCFD1-221ENST00000556534 MUC13Q9H3R2 512 aa4.54□□□□□ -1.68
SCFD1-221ENST00000556534 LTB4R2Q9NPC1 389 aa4.54□□□□□ -1.68
SCFD1-221ENST00000556534 SMC4Q9NTJ3 1288 aa4.54□□□□□ -1.68
SCFD1-221ENST00000556534 OLA1Q9NTK5 396 aaKnown RBP4.54□□□□□ -1.68
SCFD1-221ENST00000556534 CNOT8Q9UFF9 292 aaKnown RBP4.54□□□□□ -1.68
SCFD1-221ENST00000556534 PADI3Q9ULW8 664 aa4.54□□□□□ -1.68
SCFD1-221ENST00000556534 TDRD9Q8NDG6 1382 aaKnown RBP4.53□□□□□ -1.68
SCFD1-221ENST00000556534 FAM237BA0A1B0GVD1 139 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 F5H0A9 414 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-221ENST00000556534 TIPRLO75663 272 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 IPO7O95373 1038 aaKnown RBP4.53□□□□□ -1.68
SCFD1-221ENST00000556534 EGFP01133 1207 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 RRM1P23921 792 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 CHMP24386 653 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 HOXC9P31274 260 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 CLCN3P51790 818 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 CSNK2A1P68400 391 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-221ENST00000556534 RPL36AP83881 106 aaKnown RBP4.53□□□□□ -1.68
SCFD1-221ENST00000556534 ZBTB17Q13105 803 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 KRT32Q14532 448 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 SOWAHCQ53LP3 525 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-221ENST00000556534 SNX30Q5VWJ9 437 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 FAAH2Q6GMR7 532 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 NCEH1Q6PIU2 408 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 KRBA2Q6ZNG9 492 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 SATL1Q86VE3 508 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 ODF3L1Q8IXM7 274 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 ADSSL1Q8N142 457 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 BEST3Q8N1M1 668 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 CSNK2A3Q8NEV1 391 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 OR14L1PQ8NHC6 308 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 MAGEC3Q8TD91 643 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 DUSP19Q8WTR2 217 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 FIG4Q92562 907 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 TMEM68Q96MH6 324 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 DOCK7Q96N67 2140 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 PCGF1Q9BSM1 259 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 ACSS1Q9NUB1 689 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-221ENST00000556534 KCNS2Q9ULS6 477 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 NOTCH4Q99466 2003 aa4.53□□□□□ -1.68
SCFD1-221ENST00000556534 IGHV4OR15-8A0A075B7B6 117 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 DENND3A2RUS2 1198 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 LIPT2A6NK58 231 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 HNRNPCL2B2RXH8 293 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 AKR1B15C9JRZ8 316 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 PRR23D1E9PI22 279 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SCGB1D1O95968 90 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 PRR23D2P0DMB1 279 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 LAMP2P13473 410 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 CD53P19397 219 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 S1PR1P21453 382 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 FASLGP48023 281 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 DCAF7P61962 342 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SLC20A2Q08357 652 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 MED22Q15528 200 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SIGIRRQ6IA17 410 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 TTI2Q6NXR4 508 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 DUS1LQ6P1R4 473 aaKnown RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 GFRALQ6UXV0 394 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 C1orf122Q6ZSJ8 110 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SEPT14Q6ZU15 432 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 RSRC2Q7L4I2 434 aaKnown RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 CACNA2D4Q7Z3S7 1137 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 MAATS1Q7Z4T9 603 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 TBC1D1Q86TI0 1168 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 NRROSQ86YC3 692 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 ARHGAP12Q8IWW6 846 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 C1orf87Q8N0U7 546 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SRBD1Q8N5C6 995 aaKnown RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 ANKRD52Q8NB46 1076 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SPATA20Q8TB22 786 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 LNX1Q8TBB1 728 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SECTM1Q8WVN6 248 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 SORCS1Q8WY21 1168 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 ORAI1Q96D31 301 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 LMLNQ96KR4 655 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 ITPAQ9BY32 194 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 PDZD7Q9H5P4 517 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 UBTD1Q9HAC8 227 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 RANGRFQ9HD47 186 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-221ENST00000556534 PLSCR4Q9NRQ2 329 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 KCNG2Q9UJ96 466 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 ACSL5Q9ULC5 683 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 VDAC3Q9Y277 283 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 AMDHD2Q9Y303 409 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 MAU2Q9Y6X3 613 aa4.52□□□□□ -1.69
SCFD1-221ENST00000556534 A0A0G2JPF8 293 aa4.51□□□□□ -1.69
SCFD1-221ENST00000556534 PGPEP1LA6NFU8 196 aa4.51□□□□□ -1.69
SCFD1-221ENST00000556534 HNRNPCL3B7ZW38 293 aa4.51□□□□□ -1.69
SCFD1-221ENST00000556534 PRAC2D3DTV9 90 aa4.51□□□□□ -1.69
SCFD1-221ENST00000556534 CLGNO14967 610 aa4.51□□□□□ -1.69
SCFD1-221ENST00000556534 HCRTR2O43614 444 aa4.51□□□□□ -1.69
SCFD1-221ENST00000556534 USO1O60763 962 aaKnown RBP4.51□□□□□ -1.69
SCFD1-221ENST00000556534 HNRNPCL1O60812 293 aaKnown RBP4.51□□□□□ -1.69
SCFD1-221ENST00000556534 EIF2S1P05198 315 aaKnown RBP4.51□□□□□ -1.69
SCFD1-221ENST00000556534 HNRNPCL4P0DMR1 293 aa4.51□□□□□ -1.69
SCFD1-221ENST00000556534 HLA-DOBP13765 273 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms