RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SNRNP27Q8WVK2 155 aaKnown RBP22.53■■□□□ 1.2
ACTN1-220ENST00000556433 TSGA13Q96PP4 275 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 ZNF670Q9BS34 389 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 UVRAGQ9P2Y5 699 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 CHKBQ9Y259 395 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 TTLL3Q9Y4R7 772 aa22.53■■□□□ 1.2
ACTN1-220ENST00000556433 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.53■■□□□ 1.2
ACTN1-220ENST00000556433 A0A0J9YYE9 177 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 K7ENP7 123 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 ECEL1O95672 775 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 TRBC1P01850 177 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 IVLP07476 585 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 H2AFZP0C0S5 128 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 ADCY8P40145 1251 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 OR1D5P58170 312 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 CFHR1Q03591 330 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 BIRC2Q13490 618 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 IHHQ14623 411 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 AMZ1Q400G9 498 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 PHF19Q5T6S3 580 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 INO80CQ6PI98 192 aaPredicted RBP22.52■■□□□ 1.2
ACTN1-220ENST00000556433 H2AFVQ71UI9 128 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 TMPRSS9Q7Z410 1059 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 ZNF843Q8N446 348 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 LRRN4Q8WUT4 740 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 CTNNBL1Q8WYA6 563 aaPredicted RBP22.52■■□□□ 1.2
ACTN1-220ENST00000556433 SCAMP4Q969E2 229 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 TMEM159Q96B96 161 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 WBP1Q96G27 269 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 HAUS2Q9NVX0 235 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 TMEM98Q9Y2Y6 226 aa22.52■■□□□ 1.2
ACTN1-220ENST00000556433 SOD1P00441 154 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 KRT7P08729 469 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 ZNF30P17039 623 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 ITIH1P19827 911 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 ALDH4A1P30038 563 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 HNRNPH3P31942 346 aaKnown RBP22.51■■□□□ 1.19
ACTN1-220ENST00000556433 ZFYVE27Q5T4F4 411 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 ALG1LQ6GMV1 187 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 ADAMTSL4Q6UY14 1074 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 USP53Q70EK8 1073 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 PIM3Q86V86 326 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 NLRP8Q86W28 1048 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 SLITRK4Q8IW52 837 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 FATE1Q969F0 183 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 CCNL2Q96S94 520 aaPredicted RBP22.51■■□□□ 1.19
ACTN1-220ENST00000556433 CMKLR1Q99788 373 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 PACSIN1Q9BY11 444 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 XPO4Q9C0E2 1151 aaKnown RBP22.51■■□□□ 1.19
ACTN1-220ENST00000556433 SEMA6CQ9H3T2 930 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 AMACRQ9UHK6 382 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 PLEKHM1Q9Y4G2 1056 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 ST14Q9Y5Y6 855 aa22.51■■□□□ 1.19
ACTN1-220ENST00000556433 MGAQ8IWI9 3026 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 NVLO15381 856 aaKnown RBP22.5■■□□□ 1.19
ACTN1-220ENST00000556433 ZW10O43264 779 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 CPNE6O95741 557 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 MX2P20592 715 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 GBE1Q04446 702 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 NIPAL4Q0D2K0 466 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 PEX6Q13608 980 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 MAP9Q49MG5 647 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 ZNF765Q7L2R6 523 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 PQLC3Q8N755 202 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 CCNYQ8ND76 341 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 ARRDC2Q8TBH0 407 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 PATE1Q8WXA2 126 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 FAF2Q96CS3 445 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 SCARF2Q96GP6 870 aaPredicted RBP22.5■■□□□ 1.19
ACTN1-220ENST00000556433 AGAP2Q99490 1192 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 TDRD1Q9BXT4 1180 aaKnown RBP22.5■■□□□ 1.19
ACTN1-220ENST00000556433 RDH14Q9HBH5 336 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 LCMT1Q9UIC8 334 aa22.5■■□□□ 1.19
ACTN1-220ENST00000556433 AHCTF1Q8WYP5 2266 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 PRLP01236 227 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 HLA-DQB2P05538 268 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 TPM3P06753 285 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 CA4P22748 312 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 ACTR1BP42025 376 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 STC1P52823 247 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 ACTR1AP61163 376 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 SLC10A2Q12908 348 aaPredicted RBP22.49■■□□□ 1.19
ACTN1-220ENST00000556433 TGIF1Q15583 401 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 SLC18A3Q16572 532 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 KIAA1614Q5VZ46 1190 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 MARK2Q7KZI7 788 aaKnown RBP22.49■■□□□ 1.19
ACTN1-220ENST00000556433 ZNF438Q7Z4V0 828 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 TRIM74Q86UV6 250 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 NRSN1Q8IZ57 195 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 TTC9Q92623 222 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 OR2M4Q96R27 311 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 RIOK2Q9BVS4 552 aaKnown RBP22.49■■□□□ 1.19
ACTN1-220ENST00000556433 CDH19Q9H159 772 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 PCDH9Q9HC56 1237 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 ACSL6Q9UKU0 697 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 DNPEPQ9ULA0 475 aa22.49■■□□□ 1.19
ACTN1-220ENST00000556433 CAPN8A6NHC0 703 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 CLDN7O95471 211 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 PYGLP06737 847 aa22.48■■□□□ 1.19
ACTN1-220ENST00000556433 KDELR1P24390 212 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms