RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 UGP2Q16851 508 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 CFAP157Q5JU67 520 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 MROH9Q5TGP6 573 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 NAIF1Q69YI7 327 aaPredicted RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 TRNP1Q6NT89 227 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 IZUMO2Q6UXV1 221 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 CLEC20AQ6ZU45 233 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 ARMCX6Q7L4S7 300 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 LPCAT2Q7L5N7 544 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 TTC7BQ86TV6 843 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 PDSS2Q86YH6 399 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 CCDC117Q8IWD4 279 aaPredicted RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 UNC5BQ8IZJ1 945 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 LSM14AQ8ND56 463 aaKnown RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 CERS2Q96G23 380 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 TRIM62Q9BVG3 475 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 TRIM4Q9C037 500 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 DHX35Q9H5Z1 703 aaKnown RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 SMYD2Q9NRG4 433 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 ABI2Q9NYB9 513 aaPredicted RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 DTLQ9NZJ0 730 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 BFARQ9NZS9 450 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 ARMCX1Q9P291 453 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 USP3Q9Y6I4 520 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 MYOFQ9NZM1 2061 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 MTMR11A4FU01 709 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 HHLA1C9JL84 531 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 TPP1O14773 563 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 SOAT2O75908 522 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 METTL18O95568 372 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 FAM200BP0CF97 657 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 UQCRBP14927 111 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 AMPD1P23109 780 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 TYK2P29597 1187 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 HTR7P34969 479 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 GJA4P35212 333 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 NOS2P35228 1153 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 P2RY2P41231 377 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 GPR15P49685 360 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 MTTPP55157 894 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 CYP4F8P98187 520 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 IFRD2Q12894 506 aaPredicted RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 DUSP4Q13115 394 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 PDE1CQ14123 709 aaPredicted RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 PCLAFQ15004 111 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 CDO1Q16878 200 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 HSF5Q4G112 596 aaPredicted RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 HSP90AA5PQ58FG0 334 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 PPP6R3Q5H9R7 873 aaPredicted RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 IRAK1BP1Q5VVH5 260 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 NCBP2-AS2Q69YL0 99 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 PDPK2PQ6A1A2 396 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 GPRIN1Q7Z2K8 1008 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 DNAJB7Q7Z6W7 309 aaPredicted RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 LINC00523Q86TU6 105 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 SPATA2LQ8IUW3 424 aaPredicted RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 DCP1BQ8IZD4 617 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 FBXW8Q8N3Y1 598 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 MINDY1Q8N5J2 469 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 PNPLA1Q8N8W4 532 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 ATAD1Q8NBU5 361 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 MDGA1Q8NFP4 955 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 RP9Q8TA86 221 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 RIN3Q8TB24 985 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 PDCD6IPQ8WUM4 868 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 PTCD2Q8WV60 388 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 KCTD13Q8WZ19 329 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 NT5C3BQ969T7 300 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 SMARCD1Q96GM5 515 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 RBBP8Q99708 897 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 GTPBP2Q9BX10 602 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 DUSP16Q9BY84 665 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 SMG9Q9H0W8 520 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 CDH19Q9H159 772 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 C10orf88Q9H8K7 445 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 PILRBQ9UKJ0 227 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 CNOT11Q9UKZ1 510 aaKnown RBP11.16□□□□□ -0.62
SRP54-205ENST00000554803 FZD10Q9ULW2 581 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 SLC6A14Q9UN76 642 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 TBC1D30Q9Y2I9 924 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 KNL1Q8NG31 2342 aa11.16□□□□□ -0.62
SRP54-205ENST00000554803 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 ARHGAP42A6NI28 874 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 J3QKU1 62 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 RNF103O00237 685 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 BUD23O43709 281 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 TRIM13O60858 407 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 AP2A1O95782 977 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 GSRP00390 522 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 ALDOAP04075 364 aaKnown RBP11.15□□□□□ -0.62
SRP54-205ENST00000554803 CFIP05156 583 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 SERPINF2P08697 491 aa11.15□□□□□ -0.62
SRP54-205ENST00000554803 PABPC4LP0CB38 370 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms