RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 IER5LQ5T953 404 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 ERAP2Q6P179 960 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 CMC1Q7Z7K0 106 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 MMAAQ8IVH4 418 aaKnown RBP17.54■□□□□ 0.4
PSEN1-206ENST00000553447 SLC41A1Q8IVJ1 513 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 PNPLA1Q8N8W4 532 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 DENND1AQ8TEH3 1009 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 CENPTQ96BT3 561 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 MSANTD3Q96H12 275 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 TCF12Q99081 682 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 FAM96AQ9H5X1 160 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 CAB39LQ9H9S4 337 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 SLC2A4RGQ9NR83 387 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 INTS9Q9NV88 658 aaKnown RBP17.54■□□□□ 0.4
PSEN1-206ENST00000553447 INTS10Q9NVR2 710 aaKnown RBP17.54■□□□□ 0.4
PSEN1-206ENST00000553447 APPL1Q9UKG1 709 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 SLC39A10Q9ULF5 831 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 FNDC3AQ9Y2H6 1198 aaKnown RBP17.54■□□□□ 0.4
PSEN1-206ENST00000553447 SLC30A1Q9Y6M5 507 aa17.54■□□□□ 0.4
PSEN1-206ENST00000553447 A6NNZ2 444 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 LOC730098B7Z3J9 87 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 GAPDHSO14556 408 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 SRP72O76094 671 aaKnown RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 MPOP05164 745 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 SRFP11831 508 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 PMLP29590 882 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 NTSR1P30989 418 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 MMP12P39900 470 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 PSMD8P48556 350 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 CDKN1CP49918 316 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 CSRP3P50461 194 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 RALGDSQ12967 914 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 TDGQ13569 410 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 PDE1CQ14123 709 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 USP10Q14694 798 aaKnown RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 TUBB8Q3ZCM7 444 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 AARS2Q5JTZ9 985 aaKnown RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 HABP4Q5JVS0 413 aaKnown RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 TTC19Q6DKK2 380 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 PSAPL1Q6NUJ1 521 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 FAM151BQ6UXP7 276 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 GPATCH11Q8N954 259 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 MGARPQ8TDB4 240 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 TCP10LQ8TDR4 215 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 ELMO2Q96JJ3 720 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 CABS1Q96KC9 395 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 GABRG3Q99928 467 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 RSPH9Q9H1X1 276 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 IL26Q9NPH9 171 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 DYRK4Q9NR20 520 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 PKD2L2Q9NZM6 624 aa17.53■□□□□ 0.4
PSEN1-206ENST00000553447 CORO1CQ9ULV4 474 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-206ENST00000553447 GLYATL1P3A0A0U1RQE8 302 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 TM9SF1O15321 606 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 SYNCRIPO60506 623 aaKnown RBP17.52■□□□□ 0.4
PSEN1-206ENST00000553447 PRAMEF1O95521 474 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 CRHR1P34998 444 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 SPINT3P49223 89 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 TTPAP49638 278 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 SUOXP51687 545 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 GNGT1P63211 74 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 POU4F1Q01851 419 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 C2orf27AQ580R0 203 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 RBM20Q5T481 1227 aaKnown RBP17.52■□□□□ 0.4
PSEN1-206ENST00000553447 RNF187Q5TA31 235 aaPredicted RBP17.52■□□□□ 0.4
PSEN1-206ENST00000553447 FAM46CQ5VWP2 391 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 ZDHHC20Q5W0Z9 365 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 SDE2Q6IQ49 451 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 FBXL19Q6PCT2 694 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 SNX20Q7Z614 316 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 PIANPQ8IYJ0 282 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 GPR26Q8NDV2 337 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 LPGAT1Q92604 370 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.52■□□□□ 0.4
PSEN1-206ENST00000553447 ERLEC1Q96DZ1 483 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 PLEKHG4BQ96PX9 1271 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 NDNQ99608 321 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 OMDQ99983 421 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 SLC13A1Q9BZW2 595 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 VPS11Q9H270 941 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 MLXIPLQ9NP71 852 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 VPS9D1Q9Y2B5 631 aa17.52■□□□□ 0.4
PSEN1-206ENST00000553447 A0A096LPK6 155 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 PFDN6O15212 129 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 SPINT1O43278 529 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 SHOX2O60902 331 aaPredicted RBP17.51■□□□□ 0.39
PSEN1-206ENST00000553447 NDUFS3O75489 264 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 C2P06681 752 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 ADRB3P13945 408 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 ITGALP20701 1170 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 SAT1P21673 171 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 CCT5P48643 541 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 WDR4P57081 412 aaKnown RBP17.51■□□□□ 0.39
PSEN1-206ENST00000553447 TAS2R39P59534 338 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 MRPS21P82921 87 aaKnown RBP17.51■□□□□ 0.39
PSEN1-206ENST00000553447 ELP6Q0PNE2 266 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 LRRC14Q15048 493 aa17.51■□□□□ 0.39
PSEN1-206ENST00000553447 ZKSCAN8Q15776 578 aaPredicted RBP17.51■□□□□ 0.39
PSEN1-206ENST00000553447 CHRNA6Q15825 494 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms