RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 KLF6Q99612 283 aaPredicted RBP17.15■□□□□ 0.34
ITGA5-213ENST00000553071 KIFC1Q9BW19 673 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 ABCG8Q9H221 673 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 NLE1Q9NVX2 485 aaPredicted RBP17.15■□□□□ 0.34
ITGA5-213ENST00000553071 PIH1D1Q9NWS0 290 aaKnown RBP17.15■□□□□ 0.34
ITGA5-213ENST00000553071 COQ6Q9Y2Z9 468 aa17.15■□□□□ 0.34
ITGA5-213ENST00000553071 ABCA7Q8IZY2 2146 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 FAM237BA0A1B0GVD1 139 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 H7C0S8 307 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 POLBP06746 335 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 BPIP17213 487 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 KELP23276 732 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 HTR1BP28222 390 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 TRIM23P36406 574 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 GPR1P46091 355 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 ZNF140P52738 457 aaPredicted RBP17.14■□□□□ 0.33
ITGA5-213ENST00000553071 PTK2BQ14289 1009 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 PEAR1Q5VY43 1037 aaPredicted RBP17.14■□□□□ 0.33
ITGA5-213ENST00000553071 KYAT3Q6YP21 454 aaKnown RBP17.14■□□□□ 0.33
ITGA5-213ENST00000553071 ABI3BPQ7Z7G0 1075 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 EIF1ADQ8N9N8 165 aaKnown RBP17.14■□□□□ 0.33
ITGA5-213ENST00000553071 C1orf216Q8TAB5 229 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 GABPB2Q8TAK5 448 aaPredicted RBP17.14■□□□□ 0.33
ITGA5-213ENST00000553071 EID2BQ96D98 161 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 KLHDC7BQ96G42 594 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 TTC1Q99614 292 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 EBF2Q9HAK2 575 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 TM9SF3Q9HD45 589 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 GRHL1Q9NZI5 618 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 DMGDHQ9UI17 866 aaKnown RBP17.14■□□□□ 0.33
ITGA5-213ENST00000553071 SOX13Q9UN79 622 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 MAD1L1Q9Y6D9 718 aa17.14■□□□□ 0.33
ITGA5-213ENST00000553071 GLYATL1P3A0A0U1RQE8 302 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 PROB1E7EW31 1015 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 CACNB4O00305 520 aaPredicted RBP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 VILLO15195 856 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 FOXD2O60548 495 aaPredicted RBP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 AVILO75366 819 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 GM2AP17900 193 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 MAOBP27338 520 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 PPARGP37231 505 aaPredicted RBP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 C21orf59P57076 290 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 PRAMEP78395 509 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 INPP5AQ14642 412 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 IRF4Q15306 451 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 BBS9Q3SYG4 887 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 GPR33Q49SQ1 333 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 TEX35Q5T0J7 233 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 HENMT1Q5T8I9 393 aaKnown RBP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 RAET1GQ6H3X3 334 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 ADAMTSL4Q6UY14 1074 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 SUMF1Q8NBK3 374 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 GPR26Q8NDV2 337 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 UBXN4Q92575 508 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 STAMBPL1Q96FJ0 436 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 CDKN2AIPNLQ96HQ2 116 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 SGSM3Q96HU1 749 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 SIGLEC10Q96LC7 697 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 EBNA1BP2Q99848 306 aaKnown RBP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 ORAI3Q9BRQ5 295 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 RIOK2Q9BVS4 552 aaKnown RBP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 SPATA16Q9BXB7 569 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 WDR26Q9H7D7 661 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 BPIFA1Q9NP55 256 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 IL26Q9NPH9 171 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 CHRAC1Q9NRG0 131 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 PHPT1Q9NRX4 125 aaPredicted RBP17.13■□□□□ 0.33
ITGA5-213ENST00000553071 SLC30A1Q9Y6M5 507 aa17.13■□□□□ 0.33
ITGA5-213ENST00000553071 A0A0U1RQS6 177 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 BHMG1C9JSJ3 638 aaPredicted RBP17.12■□□□□ 0.33
ITGA5-213ENST00000553071 LRP3O75074 770 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 PCCBP05166 539 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 TUBBP07437 444 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 RHOXF2BP0C7M4 288 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 MCM3P25205 808 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 THOP1P52888 689 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 PFN3P60673 137 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 ACVR1Q04771 509 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 HLTFQ14527 1009 aaKnown RBP eCLIP17.12■□□□□ 0.33
ITGA5-213ENST00000553071 KCTD19Q17RG1 926 aaPredicted RBP17.12■□□□□ 0.33
ITGA5-213ENST00000553071 CCDC38Q502W7 563 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 FBXO25Q8TCJ0 367 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 ZNF398Q8TD17 642 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 HEXDCQ8WVB3 486 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 IFT81Q8WYA0 676 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 SCAMP4Q969E2 229 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.12■□□□□ 0.33
ITGA5-213ENST00000553071 ULK4Q96C45 1275 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 RHOXF2Q9BQY4 288 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 ZDHHC5Q9C0B5 715 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 GDF3Q9NR23 364 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 MBNL1Q9NR56 388 aaKnown RBP17.12■□□□□ 0.33
ITGA5-213ENST00000553071 SYBUQ9NX95 663 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 CD84Q9UIB8 345 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 SLC6A14Q9UN76 642 aa17.12■□□□□ 0.33
ITGA5-213ENST00000553071 EML5Q05BV3 1969 aa17.11■□□□□ 0.33
ITGA5-213ENST00000553071 THADAQ6YHU6 1953 aa17.11■□□□□ 0.33
ITGA5-213ENST00000553071 GOLGA8CPA6NN73 597 aa17.11■□□□□ 0.33
ITGA5-213ENST00000553071 E7ESA3 106 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms