RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 CLCN3P51790 818 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 VBP1P61758 197 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 MXD4Q14582 209 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-219ENST00000551242 CBX2Q14781 532 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-219ENST00000551242 TMEM132DQ14C87 1099 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 CTU2Q2VPK5 515 aaKnown RBP12.22□□□□□ -0.45
ERBB3-219ENST00000551242 ADPRMQ3LIE5 342 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 ZNF789Q5FWF6 425 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 TECRLQ5HYJ1 363 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 ZNF470Q6ECI4 717 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 USP43Q70EL4 1123 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 KDELC2Q7Z4H8 507 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 AKAP14Q86UN6 197 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 MMAAQ8IVH4 418 aaKnown RBP12.22□□□□□ -0.45
ERBB3-219ENST00000551242 OR7A2PQ8NGA2 310 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 SPATA22Q8NHS9 363 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 GLMNQ92990 594 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 EXT2Q93063 718 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 TMEM125Q96AQ2 219 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 HOXD1Q9GZZ0 328 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 FZD8Q9H461 694 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 TOR3AQ9H497 397 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 GSTO2Q9H4Y5 243 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 DPP3Q9NY33 737 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 PCDHGA3Q9Y5H0 932 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 BBIP1A8MTZ0 92 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 KRT75O95678 551 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 JCHAINP01591 159 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 THRBP10828 461 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-219ENST00000551242 NOS2P35228 1153 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 KCNC1P48547 511 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 NDUFA5Q16718 116 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 PRMT9Q6P2P2 845 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 C14orf80Q86SX3 495 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 KIAA2013Q8IYS2 634 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 C8orf59Q8N0T1 100 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-219ENST00000551242 MIER2Q8N344 545 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 S100ZQ8WXG8 99 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 TMBIM1Q969X1 311 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 MIR1-1HGQ9H1L0 117 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 SMURF2Q9HAU4 748 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 HPS4Q9NQG7 708 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 C8orf4Q9NR00 106 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 ABCB10Q9NRK6 738 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.22□□□□□ -0.451e-26■■■■□ 22.2
ERBB3-219ENST00000551242 RGS17Q9UGC6 210 aaPredicted RBP12.22□□□□□ -0.45
ERBB3-219ENST00000551242 PDE10AQ9Y233 779 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 SPO11Q9Y5K1 396 aa12.22□□□□□ -0.45
ERBB3-219ENST00000551242 NOBOXO60393 691 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 PEX10O60683 326 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 FARP2O94887 1054 aaPredicted RBP12.21□□□□□ -0.45
ERBB3-219ENST00000551242 PIGAP37287 484 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 SEPHS1P49903 392 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 FOXA1P55317 472 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 CDH17Q12864 832 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 NFYCQ13952 458 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 PAFAH1B3Q15102 231 aaKnown RBP12.21□□□□□ -0.45
ERBB3-219ENST00000551242 LRIT3Q3SXY7 679 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 C6orf141Q5SZD1 244 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 HS3ST5Q8IZT8 346 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 ATP6V0D2Q8N8Y2 350 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 CHDHQ8NE62 594 aaPredicted RBP12.21□□□□□ -0.45
ERBB3-219ENST00000551242 OR6B3Q8NGW1 331 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 MUL1Q969V5 352 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 CLIP3Q96DZ5 547 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 VMP1Q96GC9 406 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 BDH2Q9BUT1 245 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 KIFC1Q9BW19 673 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 MARCH7Q9H992 704 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 PAK1IP1Q9NWT1 392 aaPredicted RBP12.21□□□□□ -0.45
ERBB3-219ENST00000551242 NSMCE4AQ9NXX6 385 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 DNAJC15Q9Y5T4 150 aa12.21□□□□□ -0.45
ERBB3-219ENST00000551242 DCLK1O15075 740 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 MT-CYBP00156 380 aaPredicted RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 ALPLP05186 524 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 EIF2S1P05198 315 aaKnown RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 TSPY1Q01534 308 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 MBTD1Q05BQ5 628 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 PPP1R8Q12972 351 aaKnown RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 TMEM132BQ14DG7 1078 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 RPS6KA2Q15349 733 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 STXBP2Q15833 593 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 UGP2Q16851 508 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 OTUD1Q5VV17 481 aaPredicted RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 TAF2Q6P1X5 1199 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 ADCK1Q86TW2 530 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 RBM23Q86U06 439 aaKnown RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 ARMC8Q8IUR7 673 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 GOLM1Q8NBJ4 401 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 ANKRD49Q8WVL7 239 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 ZNF486Q96H40 463 aaPredicted RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 KCNA7Q96RP8 456 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 TRIT1Q9H3H1 467 aaKnown RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 RCOR3Q9P2K3 495 aaPredicted RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.46
ERBB3-219ENST00000551242 TNFSF13BQ9Y275 285 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 TIMM22Q9Y584 194 aa12.21□□□□□ -0.46
ERBB3-219ENST00000551242 OAS3Q9Y6K5 1087 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms