RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 LAYNQ6UX15 382 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ZNF765Q7L2R6 523 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CAND1Q86VP6 1230 aaKnown RBP14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MFSD2AQ8NA29 543 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PLA2G15Q8NCC3 412 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 OR13C4Q8NGS5 318 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 C1orf216Q8TAB5 229 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CEP76Q8TAP6 659 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 KLHDC7BQ96G42 594 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RANBP9Q96S59 729 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SPATA16Q9BXB7 569 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FRMD8Q9BZ67 464 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CDH19Q9H159 772 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SYBUQ9NX95 663 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SAMD15Q9P1V8 674 aa14.43□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SDR42E2A6NKP2 422 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 K7ESM1 405 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TSHRP16473 764 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SPAM1P38567 509 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HADHAP40939 763 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RABIFP47224 123 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DCDC1P59894 354 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DPTQ07507 201 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SKIDA1Q1XH10 827 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TRIM61Q5EBN2 209 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 KYAT3Q6YP21 454 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 KDM7AQ6ZMT4 941 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 Q6ZSR6 202 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NLRP9Q7RTR0 991 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 LRRN4CLQ8ND94 238 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FAM174AQ8TBP5 190 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 STYXQ8WUJ0 223 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 BMFQ96LC9 184 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PLEKHG4BQ96PX9 1271 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PHOX2BQ99453 314 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 EPB41L5Q9HCM4 733 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TCAF1Q9Y4C2 921 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CACNA1HO95180 2353 aa14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TP53BP1Q12888 1972 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GLYATL1P3A0A0U1RQE8 302 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ESYT3A0FGR9 886 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MROH6A6NGR9 719 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PATE3B3GLJ2 98 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PROB1E7EW31 1015 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MAGEC1O60732 1142 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PYGLP06737 847 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 THEGLP0DJG4 465 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ZNF140P52738 457 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 THOP1P52888 689 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HIF1AQ16665 826 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FNBP1LQ5T0N5 605 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HENMT1Q5T8I9 393 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FAM151BQ6UXP7 276 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ABI3BPQ7Z7G0 1075 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 IQCHQ86VS3 1027 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PDIK1LQ8N165 341 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PELI3Q8N2H9 469 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MPP5Q8N3R9 675 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TRAM1L1Q8N609 369 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 OR13H1Q8NG92 308 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DNAJC1Q96KC8 554 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 AGAP2Q99490 1192 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ZSCAN5AQ9BUG6 496 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 APOOQ9BUR5 198 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SMOC1Q9H4F8 434 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CHRAC1Q9NRG0 131 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NLE1Q9NVX2 485 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 GRHL1Q9NZI5 618 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 FKBPLQ9UIM3 349 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 OR1A2Q9Y585 309 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MAD1L1Q9Y6D9 718 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PI4KAP42356 2102 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ZNF106Q9H2Y7 1883 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TLR4O00206 839 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CACNB4O00305 520 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CCL22O00626 93 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 VILLO15195 856 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 WNT1P04628 370 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RHOXF2BP0C7M4 288 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 MAGEA3P43357 314 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DRG2P55039 364 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PLTPP55058 493 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 ARL4CP56559 192 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PFN3P60673 137 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 CAV1Q03135 178 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SPEM2Q0P670 501 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 OVGP1Q12889 678 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PDE1CQ14123 709 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TRADDQ15628 312 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 DNAJC21Q5F1R6 531 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TEX35Q5T0J7 233 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 TSTD2Q5T7W7 516 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 SLC23A3Q6PIS1 610 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NLRP8Q86W28 1048 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 HEATR4Q86WZ0 1026 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 C19orf43Q9BQ61 176 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 RHOXF2Q9BQY4 288 aa14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 NUSAP1Q9BXS6 441 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-216ENST00000543995 WDR26Q9H7D7 661 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms