RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 NUDCD3Q8IVD9 361 aa24.48■■□□□ 1.51
TTC3-225ENST00000540756 SMRP1Q8NCR6 262 aa24.48■■□□□ 1.51
TTC3-225ENST00000540756 NXNL1Q96CM4 212 aa24.48■■□□□ 1.51
TTC3-225ENST00000540756 CPSF2Q9P2I0 782 aaKnown RBP24.48■■□□□ 1.51
TTC3-225ENST00000540756 IL36AQ9UHA7 158 aa24.48■■□□□ 1.51
TTC3-225ENST00000540756 RUVBL2Q9Y230 463 aaKnown RBP24.48■■□□□ 1.51
TTC3-225ENST00000540756 PPIL1Q9Y3C6 166 aa24.48■■□□□ 1.51
TTC3-225ENST00000540756 NUMBLQ9Y6R0 609 aa24.48■■□□□ 1.51
TTC3-225ENST00000540756 UBA6A0AVT1 1052 aaPredicted RBP24.47■■□□□ 1.51
TTC3-225ENST00000540756 ARNTLO00327 626 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 ALDH3A1P30838 453 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 SLC12A2P55011 1212 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 DMTNQ08495 405 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 TAF1BQ53T94 588 aaPredicted RBP24.47■■□□□ 1.51
TTC3-225ENST00000540756 TMEM151AQ8N4L1 468 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 LPGAT1Q92604 370 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 GPR78Q96P69 363 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 MCCC1Q96RQ3 725 aaPredicted RBP24.47■■□□□ 1.51
TTC3-225ENST00000540756 LYSMD1Q96S90 227 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 IL26Q9NPH9 171 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 SIRPGQ9P1W8 387 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 B4GALT6Q9UBX8 382 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 SARDHQ9UL12 918 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 SLC8A2Q9UPR5 921 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 CHRM1P11229 460 aaPredicted RBP24.47■■□□□ 1.51
TTC3-225ENST00000540756 FMO4P31512 558 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 POLD2P49005 469 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 VASPP50552 380 aaPredicted RBP24.47■■□□□ 1.51
TTC3-225ENST00000540756 ZNF234Q14588 700 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 CHI3L2Q15782 390 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 TPRG1Q6ZUI0 275 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 OTOAQ7RTW8 1153 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 C10orf107Q8IVU9 208 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 ANKRD49Q8WVL7 239 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 TRMT61BQ9BVS5 477 aaKnown RBP24.47■■□□□ 1.51
TTC3-225ENST00000540756 NMRAL1Q9HBL8 299 aa24.47■■□□□ 1.51
TTC3-225ENST00000540756 TK2O00142 265 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 EDF1O60869 148 aaKnown RBP24.46■■□□□ 1.51
TTC3-225ENST00000540756 SBK3P0C264 359 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 CRABP2P29373 138 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 MTHFRP42898 656 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 GKAP1Q5VSY0 366 aaPredicted RBP24.46■■□□□ 1.51
TTC3-225ENST00000540756 USP45Q70EL2 814 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 TAS2R42Q7RTR8 314 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 STK40Q8N2I9 435 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 ACOX2Q99424 681 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 ANKRD6Q9Y2G4 727 aa24.46■■□□□ 1.51
TTC3-225ENST00000540756 USP15Q9Y4E8 981 aaPredicted RBP24.46■■□□□ 1.51
TTC3-225ENST00000540756 ZNF106Q9H2Y7 1883 aaKnown RBP24.46■■□□□ 1.51
TTC3-225ENST00000540756 SNX3O60493 162 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 NDUFS3O75489 264 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 PRAMEF1O95521 474 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 GSTA1P08263 222 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 CNPY4Q8N129 248 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 GPR26Q8NDV2 337 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 C20orf27Q9GZN8 174 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 COPG2Q9UBF2 871 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 MED16Q9Y2X0 877 aa24.45■■□□□ 1.51
TTC3-225ENST00000540756 TICRRQ7Z2Z1 1910 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 ECI2O75521 394 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 SRP72O76094 671 aaKnown RBP24.45■■□□□ 1.5
TTC3-225ENST00000540756 UGT1A6P19224 532 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 UGT1A1P22309 533 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 UGT1A4P22310 534 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 UGT1A3P35503 534 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 UGT1A5P35504 534 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 OVGP1Q12889 678 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 CSHL1Q14406 222 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 COL19A1Q14993 1142 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 LRIT3Q3SXY7 679 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 C9orf64Q5T6V5 341 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 HEXDCQ8WVB3 486 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 BIRC8Q96P09 236 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 NSRP1Q9H0G5 558 aaKnown RBP24.45■■□□□ 1.5
TTC3-225ENST00000540756 GPAMQ9HCL2 828 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 IGSF5Q9NSI5 407 aa24.45■■□□□ 1.5
TTC3-225ENST00000540756 INTS10Q9NVR2 710 aaKnown RBP24.45■■□□□ 1.5
TTC3-225ENST00000540756 TRIOO75962 3097 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 G3V2L1 256 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 KAT7O95251 611 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 TIMP2P16035 220 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 BST1Q10588 318 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 FSTL5Q8N475 847 aaPredicted RBP24.44■■□□□ 1.5
TTC3-225ENST00000540756 GALPQ9UBC7 116 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 F5P12259 2224 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 WISP3O95389 354 aaPredicted RBP24.44■■□□□ 1.5
TTC3-225ENST00000540756 C1SP09871 688 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 FGF3P11487 239 aaPredicted RBP24.44■■□□□ 1.5
TTC3-225ENST00000540756 FDXRP22570 491 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 CACNG1Q06432 222 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 CHRNA6Q15825 494 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 HNRNPA1L2Q32P51 320 aaKnown RBP24.44■■□□□ 1.5
TTC3-225ENST00000540756 CCDC153Q494R4 210 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 FAM45BPQ6NSW5 357 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 BRAT1Q6PJG6 821 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 FAM45AQ8TCE6 357 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 MOCOSQ96EN8 888 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 AARSD1Q9BTE6 412 aaKnown RBP24.44■■□□□ 1.5
TTC3-225ENST00000540756 TMEM245Q9H330 911 aa24.44■■□□□ 1.5
TTC3-225ENST00000540756 PCDH12Q9NPG4 1184 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms