RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 GTF3C4Q9UKN8 822 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 NAP1L2Q9ULW6 460 aaPredicted RBP4.06□□□□□ -1.76
YBX3-205ENST00000536107 CA5BQ9Y2D0 317 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 U3KQA8 63 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ARID2Q68CP9 1835 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 CSPG4Q6UVK1 2322 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 ESPL1Q14674 2120 aa4.06□□□□□ -1.76
YBX3-205ENST00000536107 JMJD1CQ15652 2540 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 TMEM131Q92545 1883 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 COL6A5A8TX70 2615 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 A6NCN8 305 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 LRRC3CA6NJW4 275 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 INPP4BO15327 924 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 MID1O15344 667 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 COCHO43405 550 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 TIMM44O43615 452 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 RAD1O60671 282 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 LRCH4O75427 683 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 SLITRK3O94933 977 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 CBX6O95503 412 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 OAS1P00973 400 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 RPLP0P05388 317 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 GIMD1P0DJR0 217 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 CXCL8P10145 99 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 HTR1EP28566 365 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 PCSK6P29122 969 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 UGT1A3P35503 534 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 RARRES1P49788 294 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 MFAP3P55082 362 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 HNRNPKP61978 463 aaKnown RBP eCLIP4.05□□□□□ -1.76
YBX3-205ENST00000536107 AKAP17AQ02040 695 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 GUCY1A3Q02108 690 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 GOLGA8FQ08AF8 430 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 GOLGA8DPQ0D2H9 430 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 TAF10Q12962 218 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 ART3Q13508 389 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 ENPP2Q13822 863 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 YOD1Q5VVQ6 348 aaPredicted RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 C9orf57Q5W0N0 161 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 ESRP1Q6NXG1 681 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 PIK3AP1Q6ZUJ8 805 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 TICAM2Q86XR7 235 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 UNC5BQ8IZJ1 945 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 CPEB3Q8NE35 698 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 LMX1AQ8TE12 382 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 PTPRN2Q92932 1015 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 C19orf60Q96EN9 201 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 ACO2Q99798 780 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 MYOCQ99972 504 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 EIF2AK1Q9BQI3 630 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 TGIF2Q9GZN2 237 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 CDH19Q9H159 772 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 CAAP1Q9H8G2 361 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 KIAA1586Q9HCI6 787 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 POLD4Q9HCU8 107 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 PRSS16Q9NQE7 514 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 DDX43Q9NXZ2 648 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 ORC3Q9UBD5 711 aaPredicted RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 MAGEC2Q9UBF1 373 aaPredicted RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 SUN2Q9UH99 717 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 IPO11Q9UI26 975 aaKnown RBP4.05□□□□□ -1.76
YBX3-205ENST00000536107 SCML1Q9UN30 329 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 OSGIN2Q9Y236 505 aa4.05□□□□□ -1.76
YBX3-205ENST00000536107 CYP3A7-CYP3A51PA0A087WV96 503 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 FRMD3A2A2Y4 597 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 ARHGEF35A5YM69 484 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 LACTBL1A8MY62 500 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 DIRC3C9JPN6 131 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 D6RAR5 112 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 PRAMEF26H0Y7S4 382 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 HUS1O60921 280 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 DNAJC6O75061 913 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 PPP6R2O75170 966 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 SORBS2O94875 1100 aaKnown RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 RASGRP1O95267 797 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 BAG4O95429 457 aaKnown RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 OLFM2O95897 454 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 CYP21A2P08686 494 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 BDNFP23560 247 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 CYP3A7P24462 503 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 ADSLP30566 484 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 CCKBRP32239 447 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 SLC8A1P32418 973 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 TAF6P49848 677 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 CCL7P80098 99 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 TLE4Q04727 773 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 FOXD4Q12950 439 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 TP53BP2Q13625 1128 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 PTK2BQ14289 1009 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 ZNF169Q14929 603 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 PFKFB3Q16875 520 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 SETMARQ53H47 684 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 CLEC9AQ6UXN8 241 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 C4orf50Q6ZRC1 276 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 BIVMQ86UB2 503 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 CATSPER3Q86XQ3 398 aa4.04□□□□□ -1.76
YBX3-205ENST00000536107 MMAAQ8IVH4 418 aaKnown RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 MB21D2Q8IYB1 491 aaPredicted RBP4.04□□□□□ -1.76
YBX3-205ENST00000536107 SDR16C5Q8N3Y7 309 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms