RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 EPHA8P29322 1005 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 PIP4K2AP48426 406 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 KRTAP10-7P60409 375 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 RELQ04864 619 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 OLIG2Q13516 323 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 PQLC2Q6ZP29 291 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 USP43Q70EL4 1123 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 CACNA2D4Q7Z3S7 1137 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 KMT5CQ86Y97 462 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 ZNF34Q8IZ26 560 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 CNTROBQ8N137 903 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 DUSP19Q8WTR2 217 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 SLC20A1Q8WUM9 679 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 ORAI1Q96D31 301 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 TMEM68Q96MH6 324 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 NR1H4Q96RI1 486 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 PCGF1Q9BSM1 259 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 ABCF3Q9NUQ8 709 aa5.02□□□□□ -1.61
PRKDC-205ENST00000535375 C9orf78Q9NZ63 289 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 INTS6Q9UL03 887 aaKnown RBP5.02□□□□□ -1.61
PRKDC-205ENST00000535375 A0A087WYN8 130 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 C16orf97H3BN30 126 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 VCYO14598 125 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 SPINT2O43291 252 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 SEC14L2O76054 403 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 FTCDO95954 541 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 AGR2O95994 175 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 ZNF182P17025 639 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-205ENST00000535375 FUT6P51993 359 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 CASP6P55212 293 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 PHEXP78562 749 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 GRIK2Q13002 908 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 CCNG2Q16589 344 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 ALG11Q2TAA5 492 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 HSP90AB4PQ58FF6 505 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 OTUD3Q5T2D3 398 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-205ENST00000535375 TRMT1LQ7Z2T5 733 aaKnown RBP5.01□□□□□ -1.61
PRKDC-205ENST00000535375 SLC9B2Q86UD5 537 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 DCUN1D3Q8IWE4 304 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 METTL27Q8N6F8 245 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-205ENST00000535375 DMBX1Q8NFW5 382 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 OR2AK2Q8NG84 335 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 BBS10Q8TAM1 723 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 PSPC1Q8WXF1 523 aaKnown RBP5.01□□□□□ -1.61
PRKDC-205ENST00000535375 ABTB1Q969K4 478 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-205ENST00000535375 UHRF2Q96PU4 802 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 SEC62Q99442 399 aaKnown RBP5.01□□□□□ -1.61
PRKDC-205ENST00000535375 AGXT2Q9BYV1 514 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 PLEKHA5Q9HAU0 1116 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 TMEM30AQ9NV96 361 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 DLGAP2Q9P1A6 1054 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 MKLN1Q9UL63 735 aa5.01□□□□□ -1.61
PRKDC-205ENST00000535375 KDM3AQ9Y4C1 1321 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 FAM237AA0A1B0GTK4 181 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 A0A1W2PPH5 198 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 A0A1W2PS18 150 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 ASPDHA6ND91 283 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 FGF17O60258 216 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 IL7RP16871 459 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 FMO5P49326 533 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 CLCN3P51790 818 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 TERF1P54274 439 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 EEF1A1P68104 462 aaKnown RBP5□□□□□ -1.61
PRKDC-205ENST00000535375 DPCR1Q3MIW9 517 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 EEF1A1P5Q5VTE0 462 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 TTI2Q6NXR4 508 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 GFRALQ6UXV0 394 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 R3HCC1LQ7Z5L2 792 aaKnown RBP5□□□□□ -1.61
PRKDC-205ENST00000535375 METTL6Q8TCB7 284 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 QRFPRQ96P65 431 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 CSTL1Q9H114 145 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 SLC28A3Q9HAS3 691 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 SDF2L1Q9HCN8 221 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 ACSS1Q9NUB1 689 aaPredicted RBP5□□□□□ -1.61
PRKDC-205ENST00000535375 MDFICQ9P1T7 246 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 RALYQ9UKM9 306 aaKnown RBP5□□□□□ -1.61
PRKDC-205ENST00000535375 ZNF711Q9Y462 761 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 CAPN7Q9Y6W3 813 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 SCN5AQ14524 2016 aa5□□□□□ -1.61
PRKDC-205ENST00000535375 TCF20Q9UGU0 1960 aaKnown RBP4.99□□□□□ -1.61
PRKDC-205ENST00000535375 A0A1B0GVC2 190 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 FAM172BPA6NC97 362 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 LILRA5A6NI73 299 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 SOCS5O75159 536 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 NKX2-2O95096 273 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 SPARCP09486 303 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 CORO1AP31146 461 aaKnown RBP4.99□□□□□ -1.61
PRKDC-205ENST00000535375 RPL7AP62424 266 aaKnown RBP4.99□□□□□ -1.61
PRKDC-205ENST00000535375 RBBP5Q15291 538 aaKnown RBP4.99□□□□□ -1.61
PRKDC-205ENST00000535375 CCDC96Q2M329 555 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 ALFQ53S48 1182 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 DCST1Q5T197 706 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 FRG2Q64ET8 278 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 MMS22LQ6ZRQ5 1243 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 GPR180Q86V85 440 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 TMEM219Q86XT9 240 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 C1orf87Q8N0U7 546 aa4.99□□□□□ -1.61
PRKDC-205ENST00000535375 PCDH20Q8N6Y1 951 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms