RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 Q6ZVL8 140 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 CACNA2D3Q8IZS8 1091 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 AGBL5Q8NDL9 886 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 NEK11Q8NG66 645 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 SPOCK2Q92563 424 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 DDA1Q9BW61 102 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 CDH19Q9H159 772 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 SLC39A1Q9NY26 324 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 GOLGA6AQ9NYA3 693 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 SEPT3Q9UH03 358 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 SLC17A4Q9Y2C5 497 aa17.27■□□□□ 0.36
PKP3-208ENST00000531857 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.26■□□□□ 0.35
PKP3-208ENST00000531857 NPIPB15A6NHN6 443 aaPredicted RBP17.26■□□□□ 0.35
PKP3-208ENST00000531857 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
PKP3-208ENST00000531857 ZW10O43264 779 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 PEX11BO96011 259 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 CPP00450 1065 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 TPM2P07951 284 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 CR2P20023 1033 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 TNFAIP3P21580 790 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 CSTF2P33240 577 aaKnown RBP eCLIP17.26■□□□□ 0.35
PKP3-208ENST00000531857 RENBPP51606 427 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 COPB1P53618 953 aaKnown RBP17.26■□□□□ 0.35
PKP3-208ENST00000531857 SQSTM1Q13501 440 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 TMCO4Q5TGY1 634 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 ANKS6Q68DC2 871 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 RAET1GQ6H3X3 334 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 RFLNAQ6ZTI6 216 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 TSPAN33Q86UF1 283 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 ZNF761Q86XN6 746 aaPredicted RBP17.26■□□□□ 0.35
PKP3-208ENST00000531857 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
PKP3-208ENST00000531857 TRIM7Q9C029 511 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 NOD2Q9HC29 1040 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 KCNK4Q9NYG8 393 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 CWC15Q9P013 229 aaKnown RBP17.26■□□□□ 0.35
PKP3-208ENST00000531857 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
PKP3-208ENST00000531857 NBASA2RRP1 2371 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 RELNP78509 3460 aa17.26■□□□□ 0.35
PKP3-208ENST00000531857 TRBV23OR9-2A0A075B6M9 112 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 EFCAB7A8K855 629 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 TMCO5BA8MYB1 307 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 NKX2-8O15522 239 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 RAD1O60671 282 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 SOCS5O75159 536 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 SOD1P00441 154 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 IVLP07476 585 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 DESP17661 470 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 MIPP30301 263 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 ACTR1BP42025 376 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 CCR10P46092 362 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 ACTR1AP61163 376 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 TRAF2Q12933 501 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 DPYSQ14117 519 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 IGFBP7Q16270 282 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 FAM129CQ86XR2 697 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 BMPERQ8N8U9 685 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 CCDC112Q8NEF3 446 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 SCARF2Q96GP6 870 aaPredicted RBP17.25■□□□□ 0.35
PKP3-208ENST00000531857 NUDCD1Q96RS6 583 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 ANKMY1Q9P2S6 941 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 CD84Q9UIB8 345 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 TMEM98Q9Y2Y6 226 aa17.25■□□□□ 0.35
PKP3-208ENST00000531857 ZNF106Q9H2Y7 1883 aaKnown RBP17.24■□□□□ 0.35
PKP3-208ENST00000531857 LGALS16A8MUM7 142 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 B4E171 279 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 CTPS1P17812 591 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 TSPAN7P41732 249 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 MAXP61244 160 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 UBAP2LQ14157 1087 aaKnown RBP17.24■□□□□ 0.35
PKP3-208ENST00000531857 ZNF235Q14590 738 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 DCAF12Q5T6F0 453 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 PLEKHA7Q6IQ23 1121 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 TMEM71Q6P5X7 295 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 TECPR1Q7Z6L1 1165 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 TRIM74Q86UV6 250 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 FNIP1Q8TF40 1166 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 ZNF599Q96NL3 588 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 SMIM14Q96QK8 99 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 SYT11Q9BT88 431 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 ASPSCR1Q9BZE9 553 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 SPRY4Q9C004 299 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 PARVAQ9NVD7 372 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 KCTD5Q9NXV2 234 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 IFNKQ9P0W0 207 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 TUBD1Q9UJT1 453 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 PILRAQ9UKJ1 303 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 PHTF1Q9UMS5 762 aa17.24■□□□□ 0.35
PKP3-208ENST00000531857 UTP20O75691 2785 aaKnown RBP17.23■□□□□ 0.35
PKP3-208ENST00000531857 LRRK2Q5S007 2527 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 A0A1W2PQ67 120 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 TMEM191CA6NGB0 347 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 LRRC10BA6NIK2 292 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 ZNF891A8MT65 544 aaPredicted RBP17.23■□□□□ 0.35
PKP3-208ENST00000531857 A8MU76 341 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 PSMD11O00231 422 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 DUX1O43812 170 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 EML2O95834 649 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 CYP2A6P11509 494 aaPredicted RBP17.23■□□□□ 0.35
PKP3-208ENST00000531857 TEAD1P28347 426 aa17.23■□□□□ 0.35
PKP3-208ENST00000531857 GPR1P46091 355 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms