RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 NSUN5Q96P11 429 aaKnown RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 KCNA7Q96RP8 456 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 HGH1Q9BTY7 390 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 ZDHHC6Q9H6R6 413 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 PTGDR2Q9Y5Y4 395 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 HTTP42858 3142 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 PEX11BO96011 259 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 IL1BP01584 269 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 STX5Q13190 355 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 IHHQ14623 411 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 LPCAT4Q643R3 524 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 RBM23Q86U06 439 aaKnown RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 CDYL2Q8N8U2 506 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 ULK4Q96C45 1275 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 PPM1HQ9ULR3 514 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 V9GYQ6 96 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 CCDC160A6NGH7 325 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 WFS1O76024 890 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 BAIAP3O94812 1187 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 VNN2O95498 520 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 ITGAXP20702 1163 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 NRG1Q02297 640 aaPredicted RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 BTKQ06187 659 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 MTA1Q13330 715 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 TECRLQ5HYJ1 363 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 PSAPL1Q6NUJ1 521 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 CNKSR3Q6P9H4 555 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 EP400NLQ6ZTU2 488 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 DET1Q7L5Y6 550 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 SETD3Q86TU7 594 aaPredicted RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 FIBCD1Q8N539 461 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 CDC26Q8NHZ8 85 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 SH3RF2Q8TEC5 729 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 PRICKLE1Q96MT3 831 aaPredicted RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 C1QTNF1Q9BXJ1 281 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 MMADHCQ9H3L0 296 aaPredicted RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 DLGAP2Q9P1A6 1054 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 AURKCQ9UQB9 309 aa11.33□□□□□ -0.6
CLK4-206ENST00000520878 COPG1Q9Y678 874 aaKnown RBP11.33□□□□□ -0.6
CLK4-206ENST00000520878 ATP5BP06576 529 aaKnown RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 LAG3P18627 525 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 KCNC1P48547 511 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 PIK3CGP48736 1102 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 KLC1Q07866 573 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 TRAF2Q12933 501 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 SEMA3AQ14563 771 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 TMEM154Q6P9G4 183 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 APCDD1Q8J025 514 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 FAR2Q96K12 515 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 FEM1AQ9BSK4 669 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 C1orf50Q9BV19 199 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 VCXQ9H320 206 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 MRM3Q9HC36 420 aaKnown RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 IGSF5Q9NSI5 407 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 SUN2Q9UH99 717 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 POMPQ9Y244 141 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 AK5Q9Y6K8 562 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 GRID2O43424 1007 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 CLASP2O75122 1294 aaKnown RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 CLTBP09497 229 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 HGFP14210 728 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 CD1EP15812 388 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ITGALP20701 1170 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 HMOX2P30519 316 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 TTPAP49638 278 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 STC1P52823 247 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 PRMT2P55345 433 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 RALGDSQ12967 914 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 CYTH1Q15438 398 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 PITRM1Q5JRX3 1037 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 METTL21CQ5VZV1 264 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 TPGS2Q68CL5 300 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 EBF2Q9HAK2 575 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ZFYVE1Q9HBF4 777 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ARNT2Q9HBZ2 717 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 PFDN4Q9NQP4 134 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ASAH2Q9NR71 780 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 IGLV3-10A0A075B6K4 115 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 TRAV19A0A0A6YYK7 116 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 NEDD8-MDP1E9PL57 170 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 SMAD6O43541 496 aaKnown RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 MSLNQ13421 630 aaPredicted RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 CBX2Q14781 532 aaPredicted RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 AARS2Q5JTZ9 985 aaKnown RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 DDX53Q86TM3 631 aaKnown RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.32□□□□□ -0.6
CLK4-206ENST00000520878 PIANPQ8IYJ0 282 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 SLC43A3Q8NBI5 491 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ICA1LQ8NDH6 482 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 MDGA1Q8NFP4 955 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 RP9Q8TA86 221 aaKnown RBP11.32□□□□□ -0.6
CLK4-206ENST00000520878 MYLIPQ8WY64 445 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 PBXIP1Q96AQ6 731 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 PTERQ96BW5 349 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 MYO19Q96H55 970 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ZNF570Q96NI8 536 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ZNF599Q96NL3 588 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms