RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 NTN3O00634 580 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 B4GAT1O43505 415 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 PSTPIP1O43586 416 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 TLX3O43711 291 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 FGF1P05230 155 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 MYCLP1P12525 358 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 PECAM1P16284 738 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 PTPN3P26045 913 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 CD68P34810 354 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 GPR1P46091 355 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 MARCKSL1P49006 195 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 SPINT3P49223 89 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 CCL7P80098 99 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 WASHC5Q12768 1159 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 TFDP2Q14188 446 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 ISXQ2M1V0 245 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 ADAMTSL4Q6UY14 1074 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 BZW1Q7L1Q6 419 aaKnown RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 TMC3Q7Z5M5 1100 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 RAVER1Q8IY67 606 aaKnown RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 KATNAL2Q8IYT4 538 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 NRSN1Q8IZ57 195 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 LPCAT1Q8NF37 534 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 SPATA22Q8NHS9 363 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 KRT35Q92764 455 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 AP2M1Q96CW1 435 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 COX14Q96I36 57 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 TEKT5Q96M29 485 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 CCDC3Q9BQI4 270 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 RIOK2Q9BVS4 552 aaKnown RBP9.31□□□□□ -0.92
HDAC3-215ENST00000519474 SLC25A51Q9H1U9 297 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 WDR26Q9H7D7 661 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 GLOD4Q9HC38 313 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 SEPT10Q9P0V9 454 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 SIRPGQ9P1W8 387 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 SUFUQ9UMX1 484 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 SLC17A4Q9Y2C5 497 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 PLEKHM1Q9Y4G2 1056 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 TTLL3Q9Y4R7 772 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 PCDHA3Q9Y5H8 950 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 ENTPD2Q9Y5L3 495 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 CACNA1BQ00975 2339 aa9.31□□□□□ -0.92
HDAC3-215ENST00000519474 hCG_1818297A0A087WSY0 165 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 A0A087WV48 116 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 A0A1W2PQM1 296 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 GOLGA6CA6NDK9 693 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 GOLGA6BA6NDN3 693 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 CAPN8A6NHC0 703 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 BTNL10A8MVZ5 291 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 PPP1R12AO14974 1030 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 PJA2O43164 708 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 USP12O75317 370 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 CSO75390 466 aaKnown RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 MT-CYBP00156 380 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 IVLP07476 585 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 GOLGA6DP0CG33 693 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 AK4P27144 223 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 ADCY8P40145 1251 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 EIF2S3P41091 472 aaKnown RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 LSSP48449 732 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 CDK18Q07002 472 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 PRKD1Q15139 912 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 ODF2Q5BJF6 829 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 TFDP3Q5H9I0 405 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 RAET1GQ6H3X3 334 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 ZNF765Q7L2R6 523 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 PID1Q7Z2X4 250 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 C17orf82Q86X59 251 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 TMEM139Q8IV31 216 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 ARL10Q8N8L6 244 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 KYQ8NBH2 561 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 EXD1Q8NHP7 514 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 TFB1MQ8WVM0 346 aaKnown RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 FGF11Q92914 225 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 NAT6Q93015 286 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 PRR11Q96HE9 360 aaPredicted RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 HIC2Q96JB3 615 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 DEPDC7Q96QD5 511 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 HERPUD2Q9BSE4 406 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 HEMGNQ9BXL5 484 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 ADGRE3Q9BY15 652 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 DPEP2Q9H4A9 486 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 FAM83DQ9H4H8 585 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 CARS2Q9HA77 564 aaKnown RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 MAGEE1Q9HCI5 957 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 HAUS2Q9NVX0 235 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 TRNAU1APQ9NX07 287 aaKnown RBP9.3□□□□□ -0.92
HDAC3-215ENST00000519474 GOLGA6AQ9NYA3 693 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 LRIT1Q9P2V4 623 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 RPS6KL1Q9Y6S9 549 aa9.3□□□□□ -0.92
HDAC3-215ENST00000519474 A0A0U1RQJ8 604 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 C1orf232A0A0U1RR37 186 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 LOC285095A0A1B0GVY8 99 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 RGSL1A5PLK6 1076 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 FADS2P1A8MWK0 482 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 INPP4BO15327 924 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 BRINP1O60477 761 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 DNAJC6O75061 913 aa9.29□□□□□ -0.92
HDAC3-215ENST00000519474 MPOP05164 745 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms