RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CDCP2	Q5VXM1	449 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	ZC3H18	Q86VM9	953 aa	Known RBP	24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	MARCH9	Q86YJ5	346 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	UBL4B	Q8N7F7	174 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	SPC24	Q8NBT2	197 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	ACRBP	Q8NEB7	543 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	FAM46D	Q8NEK8	389 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	MDM1	Q8TC05	714 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	KRT35	Q92764	455 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	HAUS1	Q96CS2	278 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	HIC2	Q96JB3	615 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	FRMD8	Q9BZ67	464 aa	Predicted RBP	24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	MAGEE1	Q9HCI5	957 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	MRPL40	Q9NQ50	206 aa	Known RBP	24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	SIRPG	Q9P1W8	387 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	SAE1	Q9UBE0	346 aa	Predicted RBP	24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	SLC17A4	Q9Y2C5	497 aa		24.09	■■□□□ 1.45
CNOT7-204	ENST00000518885	PLXNB3	Q9ULL4	1909 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	RCCD1	A6NED2	376 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	ZW10	O43264	779 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	STK10	O94804	968 aa	Known RBP	24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	CAPNS1	P04632	268 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	IVL	P07476	585 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	CELA2B	P08218	269 aa	Predicted RBP	24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	PTPN7	P35236	360 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	MARCKSL1	P49006	195 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	GSDMD	P57764	484 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	GALNT3	Q14435	633 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	IHH	Q14623	411 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	RTP5	Q14D33	572 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	PTPRR	Q15256	657 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	PCSK7	Q16549	785 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	RBM44	Q6ZP01	1051 aa	Known RBP	24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	PELI3	Q8N2H9	469 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	HTR3C	Q8WXA8	447 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	QKI	Q96PU8	341 aa	Known RBP eCLIP	24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	HEMGN	Q9BXL5	484 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	TMEM168	Q9H0V1	697 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	DPEP2	Q9H4A9	486 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	FAM83D	Q9H4H8	585 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	ZFYVE1	Q9HBF4	777 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	FAM153A	Q9UHL3	310 aa		24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	REXO2	Q9Y3B8	237 aa	Known RBP	24.08	■■□□□ 1.45
CNOT7-204	ENST00000518885	FREM2	Q5SZK8	3169 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	MIF4GD	A9UHW6	222 aa	Known RBP	24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	TJP3	O95049	919 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	NDST3	O95803	873 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	CEACAM5	P06731	702 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	GNPDA1	P46926	289 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	SPINT3	P49223	89 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	CLDN6	P56747	220 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	LLGL1	Q15334	1064 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	TCEA2	Q15560	299 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	PEX26	Q7Z412	305 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	KY	Q8NBH2	561 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	SCAMP4	Q969E2	229 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	CCDC3	Q9BQI4	270 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	RIOK2	Q9BVS4	552 aa	Known RBP	24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	LACRT	Q9GZZ8	138 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	AMFR	Q9UKV5	643 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	SUFU	Q9UMX1	484 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	DUSP10	Q9Y6W6	482 aa		24.07	■■□□□ 1.44
CNOT7-204	ENST00000518885	MACROD2	A1Z1Q3	448 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885		H7C0C1	242 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	ATP5O	P48047	213 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	ITPRIPL1	Q6GPH6	555 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	PID1	Q7Z2X4	250 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	KDELC2	Q7Z4H8	507 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	CDKL3	Q8IVW4	592 aa	Predicted RBP	24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	LSMEM2	Q8N112	164 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	GPBAR1	Q8TDU6	330 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	UBE2Q2	Q8WVN8	375 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	TADA1	Q96BN2	335 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	TRIB3	Q96RU7	358 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	OSBPL8	Q9BZF1	889 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	GPR63	Q9BZJ6	419 aa		24.06	■■□□□ 1.44
CNOT7-204	ENST00000518885	GOLGA6L9	A6NEM1	432 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	CS	O75390	466 aa	Known RBP	24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	PMPCB	O75439	489 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	EPO	P01588	193 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	GLB1	P16278	677 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	BIRC2	Q13490	618 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	LRP8	Q14114	963 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	SPIDR	Q14159	915 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	OGFOD3	Q6PK18	319 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	DOK6	Q6PKX4	331 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	GALNT13	Q8IUC8	556 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	GPR156	Q8NFN8	814 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	LRRC45	Q96CN5	670 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	PPP1R2P1	Q96PQ5	205 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	SMIM14	Q96QK8	99 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	TSGA10	Q9BZW7	698 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	TRABD	Q9H4I3	376 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	VPS18	Q9P253	973 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	LRP4	O75096	1905 aa		24.05	■■□□□ 1.44
CNOT7-204	ENST00000518885	CACNA1B	Q00975	2339 aa		24.04	■■□□□ 1.44
CNOT7-204	ENST00000518885		B4DGG1	531 aa		24.04	■■□□□ 1.44
CNOT7-204	ENST00000518885	TMX2-CTNND1	H3BSU7	103 aa		24.04	■■□□□ 1.44
CNOT7-204	ENST00000518885	ASMTL	O95671	621 aa		24.04	■■□□□ 1.44
CNOT7-204	ENST00000518885	MT-CYB	P00156	380 aa	Predicted RBP	24.04	■■□□□ 1.44

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms