RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 HNRNPRO43390 633 aaKnown RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 DNPH1O43598 174 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CHMP2AO43633 222 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ENTPD3O75355 529 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 LARGE1O95461 756 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TTLL1O95922 423 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MT-ATP6P00846 226 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 VIPP01282 170 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ENO1P06733 434 aaKnown RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ANXA6P08133 673 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ARP10275 920 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TXNP10599 105 aaKnown RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CLUP10909 449 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TPH1P17752 444 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MYF6P23409 242 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 GABRB3P28472 473 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CSTF2P33240 577 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MDH1P40925 334 aaKnown RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SLC15A1P46059 708 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 NPY4RP50391 375 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CDH15P55291 814 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SLC8A3P57103 927 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 NXPH1P58417 271 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TUBA1BP68363 451 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ASIC1P78348 528 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 DSC2Q02487 901 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 PTP4A2Q12974 167 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CHIT1Q13231 466 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 LAMB3Q13751 1172 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 BAATQ14032 418 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 DHX34Q14147 1143 aaKnown RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 RPS6KA1Q15418 735 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SLC5A9Q2M3M2 681 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 DPCR1Q3MIW9 517 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MDH1BQ5I0G3 518 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MPP7Q5T2T1 576 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ARHGAP17Q68EM7 881 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 C11orf87Q6NUJ2 197 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MOXD1Q6UVY6 613 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 LRIG3Q6UXM1 1119 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TUBA1AQ71U36 451 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 HAUS6Q7Z4H7 955 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TADA2BQ86TJ2 420 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MFN1Q8IWA4 741 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 FAM217AQ8IXS0 508 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CFAP52Q8N1V2 620 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 FBXW8Q8N3Y1 598 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 FSTL5Q8N475 847 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TMIEQ8NEW7 156 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 Q8NFD4 153 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SEMA6DQ8NFY4 1073 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SCAMP5Q8TAC9 235 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SLC22A8Q8TCC7 542 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 IP6K1Q92551 441 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MR1Q95460 341 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SPSB4Q96A44 273 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZBTB9Q96C00 473 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 C14orf79Q96F83 325 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MSANTD3Q96H12 275 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 LRIG1Q96JA1 1093 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 NSMCE2Q96MF7 247 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 C5orf34Q96MH7 638 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 HS6ST2Q96MM7 605 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 NLRP4Q96MN2 994 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MAP7D2Q96T17 732 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 COQ7Q99807 217 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 DDX50Q9BQ39 737 aaKnown RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 PIMREGQ9BSJ6 248 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CRNKL1Q9BZJ0 848 aaKnown RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 PCDHAC1Q9H158 963 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TRPV6Q9H1D0 765 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 DNAJC18Q9H819 358 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 AKIRIN1Q9H9L7 192 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZBTB26Q9HCK0 441 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 KLC4Q9NSK0 619 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 RRP7BPQ9NSQ0 103 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 MPP6Q9NZW5 540 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CHMP5Q9NZZ3 219 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 EMC3Q9P0I2 261 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 C5AR2Q9P296 337 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 RGS17Q9UGC6 210 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 FETUBQ9UGM5 382 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 FBXW2Q9UKT8 454 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 SARDHQ9UL12 918 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 ZMYND8Q9ULU4 1186 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 PCDHA13Q9Y5I0 950 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 PCDHA1Q9Y5I3 950 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 CLDN16Q9Y5I7 305 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 U3KQV3 271 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 V9GYY5 206 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TTC41PQ6P2S7 1318 aa3.65□□□□□ -1.83
HMGB3P15-201ENST00000507326 TRBV2A0A0J9YWF9 115 aa3.64□□□□□ -1.83
HMGB3P15-201ENST00000507326 ERICH2A1L162 156 aa3.64□□□□□ -1.83
HMGB3P15-201ENST00000507326 AQP7P3A6NL99 342 aa3.64□□□□□ -1.83
HMGB3P15-201ENST00000507326 BTBD18B2RXH4 712 aa3.64□□□□□ -1.83
HMGB3P15-201ENST00000507326 STX16-NPEPL1H3BU86 382 aa3.64□□□□□ -1.83
HMGB3P15-201ENST00000507326 STX16O14662 325 aa3.64□□□□□ -1.83
HMGB3P15-201ENST00000507326 SULT1B1O43704 296 aa3.64□□□□□ -1.83
HMGB3P15-201ENST00000507326 TLR2O60603 784 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms