RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TMCO4Q5TGY1 634 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 PRAMEF17Q5VTA0 474 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF385CQ66K41 422 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SPOPLQ6IQ16 392 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 HEPHL1Q6MZM0 1159 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 FBXL22Q6P050 247 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 BLOC1S2Q6QNY1 142 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CERS6Q6ZMG9 384 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 PRSS42Q7Z5A4 293 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 PPP1R32Q7Z5V6 425 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 FGD2Q7Z6J4 655 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SPPL2CQ8IUH8 684 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SLC9A9Q8IVB4 645 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ZZZ3Q8IYH5 903 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 DSELQ8IZU8 1212 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SCML4Q8N228 414 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 LILRB4Q8NHJ6 448 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 EPS8L1Q8TE68 723 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 DQX1Q8TE96 717 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SHC3Q92529 594 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TATDN2Q93075 761 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 MR1Q95460 341 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SYAP1Q96A49 352 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TMEM125Q96AQ2 219 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 AHCYL2Q96HN2 611 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CNDP1Q96KN2 507 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CCDC114Q96M63 670 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 LRFN5Q96NI6 719 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SLC38A3Q99624 504 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TBC1D10AQ9BXI6 508 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 C1QTNF7Q9BXJ2 289 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 GSDMCQ9BYG8 508 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 FRMD8Q9BZ67 464 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 CARS2Q9HA77 564 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 GPAMQ9HCL2 828 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 SARS2Q9NP81 518 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 ABCC13Q9NSE7 274 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 BEX4Q9NWD9 120 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 VPS28Q9UK41 221 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TLR6Q9Y2C9 796 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 LUC7L2Q9Y383 392 aaKnown RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 PCYT1BQ9Y5K3 369 aaPredicted RBP3.31□□□□□ -1.88
TCOF1-208ENST00000506063 HRH3Q9Y5N1 445 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 EML6Q6ZMW3 1958 aa3.31□□□□□ -1.88
TCOF1-208ENST00000506063 TRBV23OR9-2A0A075B6M9 112 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 A0A0D9SEW6 157 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF233A6NK53 670 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 A6NNC1 897 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 E9PLN8 166 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 MEN1O00255 615 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CLDN4O14493 209 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 NEMP1O14524 444 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 SPTLC2O15270 562 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 SHOX2O60902 331 aaPredicted RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CPNE3O75131 537 aaKnown RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CNOT3O75175 753 aaKnown RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ALOX12BO75342 701 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 KLHL18O94889 574 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ZRANB2O95218 330 aaKnown RBP eCLIP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 MOCS2O96007 188 aaPredicted RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ERBB2P04626 1255 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 UGT2B4P06133 528 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 FAM157CP0CG43 387 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 DLATP10515 647 aaKnown RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 NID1P14543 1247 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 IDEP14735 1019 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 XBP1P17861 261 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ADCY8P40145 1251 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CASP4P49662 377 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 SERPINH1P50454 418 aaKnown RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PPP1CAP62136 330 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PITX1P78337 314 aaPredicted RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CLDN10P78369 228 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ARF5P84085 180 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 HHEXQ03014 270 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CYP24A1Q07973 514 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ILF3Q12906 894 aaKnown RBP eCLIP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 RALGDSQ12967 914 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 KEAP1Q14145 624 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 MCM6Q14566 821 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 NCF4Q15080 339 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PCBP2Q15366 365 aaKnown RBP eCLIP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 SURF1Q15526 300 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PDCD2Q16342 344 aaPredicted RBP3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF699Q32M78 642 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 MYLK3Q32MK0 819 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 C5orf22Q49AR2 442 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CARD16Q5EG05 197 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF789Q5FWF6 425 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF667Q5HYK9 610 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 TTC38Q5R3I4 469 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PRSS57Q6UWY2 283 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 C3P1Q6ZMU1 363 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CAPN12Q6ZSI9 719 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 TAC4Q86UU9 113 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 CHSY1Q86X52 802 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 DOLPP1Q86YN1 238 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 PLPP6Q8IY26 295 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 ZNF683Q8IZ20 524 aa3.3□□□□□ -1.88
TCOF1-208ENST00000506063 VWA5B2Q8N398 1253 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms