RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 CTRCQ99895 268 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 AGPAT1Q99943 283 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 CLSTN2Q9H4D0 955 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 PCSK1NQ9UHG2 260 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 MAN2B2Q9Y2E5 1009 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 BOD1L1Q8NFC6 3051 aa14.2□□□□□ -0.14
VARS-228ENST00000495010 LOC101059948A0A1B0GTJ6 334 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 TCRBV5S1A1TA0A578 114 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 EPHB6O15197 1021 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 HTRA2O43464 458 aaPredicted RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 RNF8O76064 485 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 TCN2P20062 427 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 HSPA9P38646 679 aaKnown RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 COPB1P53618 953 aaKnown RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 MC2RQ01718 297 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 SLC10A7Q0GE19 358 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 ABHD18Q0P651 414 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 CA9Q16790 459 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 C4orf17Q53FE4 359 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 CT47A1Q5JQC4 288 aaPredicted RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 PPP1R15BQ5SWA1 713 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 Q6ZVL8 140 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 USP45Q70EL2 814 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 MARK2Q7KZI7 788 aaKnown RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 ZNF761Q86XN6 746 aaPredicted RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 GALNT13Q8IUC8 556 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 UNC5BQ8IZJ1 945 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 NDUFAF2Q8N183 169 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 NSMCE1Q8WV22 266 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 NCSTNQ92542 709 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 ZNF599Q96NL3 588 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 NUDCD1Q96RS6 583 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 KCTD15Q96SI1 283 aaPredicted RBP14.19□□□□□ -0.14
VARS-228ENST00000495010 LRRC4CQ9HCJ2 640 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 TMEM98Q9Y2Y6 226 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 PLEKHM1Q9Y4G2 1056 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 ST14Q9Y5Y6 855 aa14.19□□□□□ -0.14
VARS-228ENST00000495010 PRPSAP2O60256 369 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 ASMTLO95671 621 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 CCDC172P0C7W6 258 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 MAPK9P45984 424 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 FASLGP48023 281 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 OGDHQ02218 1023 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 KLRB1Q12918 225 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 LRP8Q14114 963 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 KRT31Q15323 416 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 ACAD10Q6JQN1 1059 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 WDR74Q6RFH5 385 aaPredicted RBP14.18□□□□□ -0.14
VARS-228ENST00000495010 MCOLN2Q8IZK6 566 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 NPWQ8N729 165 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 BMPERQ8N8U9 685 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 STARD8Q92502 1023 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 SH3KBP1Q96B97 665 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 AP2M1Q96CW1 435 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 SCRN2Q96FV2 425 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 NSMCE3Q96MG7 304 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 SNRNP25Q9BV90 132 aaKnown RBP14.18□□□□□ -0.14
VARS-228ENST00000495010 FBXO8Q9NRD0 319 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 PARVAQ9NVD7 372 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 PDP2Q9P2J9 529 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 CD84Q9UIB8 345 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 PLAAQ9Y263 795 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 PCDHB3Q9Y5E6 796 aa14.18□□□□□ -0.14
VARS-228ENST00000495010 NPIPB15A6NHN6 443 aaPredicted RBP14.17□□□□□ -0.14
VARS-228ENST00000495010 PRR19A6NJB7 356 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 POLR1CO15160 346 aaPredicted RBP14.17□□□□□ -0.14
VARS-228ENST00000495010 STK17BO94768 372 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 MAP3K6O95382 1288 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 PYGLP06737 847 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 LHCGRP22888 699 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 OAS2P29728 719 aaKnown RBP14.17□□□□□ -0.14
VARS-228ENST00000495010 ZNF135P52742 658 aaPredicted RBP14.17□□□□□ -0.14
VARS-228ENST00000495010 HHEXQ03014 270 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 DPTQ07507 201 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 NFATC2Q13469 925 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 PYCR3Q53H96 274 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 ARMC12Q5T9G4 340 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 PPP1R2P3Q6NXS1 205 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 ADAMTSL4Q6UY14 1074 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 TEX19Q8NA77 164 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 ANKRD20A12PQ8NF67 263 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 SLC37A2Q8TED4 501 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 SCARF2Q96GP6 870 aaPredicted RBP14.17□□□□□ -0.14
VARS-228ENST00000495010 ZWILCHQ9H900 591 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 NOD2Q9HC29 1040 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 KLHL3Q9UH77 587 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 ZNHIT2Q9UHR6 403 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 KCTD3Q9Y597 815 aa14.17□□□□□ -0.14
VARS-228ENST00000495010 BLACEA4D250 179 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 CLEC18AA5D8T8 446 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 SLC2A4P14672 509 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 CTPS1P17812 591 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 TNFAIP3P21580 790 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 HCAR3P49019 387 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 TRAF2Q12933 501 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 MAMLD1Q13495 774 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 RALGPS1Q5JS13 557 aa14.16□□□□□ -0.14
VARS-228ENST00000495010 CLEC18BQ6UXF7 455 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms