RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 B3GNT8Q7Z7M8 397 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 OR8K1Q8NGG5 319 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 SCARF2Q96GP6 870 aaPredicted RBP12.42□□□□□ -0.42
COL6A1-205ENST00000492851 ADGRE3Q9BY15 652 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 FOXP3Q9BZS1 431 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 SPATS2LQ9NUQ6 558 aaKnown RBP12.42□□□□□ -0.42
COL6A1-205ENST00000492851 TAAR2Q9P1P5 351 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 ATXN7L1Q9ULK2 861 aaPredicted RBP12.42□□□□□ -0.42
COL6A1-205ENST00000492851 LOXL2Q9Y4K0 774 aa12.42□□□□□ -0.42
COL6A1-205ENST00000492851 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 ZNF487B1APH4 448 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 HGSO14964 777 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-205ENST00000492851 PDHA1P08559 390 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 CD48P09326 243 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 CTPS1P17812 591 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 ALDH4A1P30038 563 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 ADCY8P40145 1251 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 ARHGAP25P42331 645 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 B4GALNT1Q00973 533 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 CLN3Q13286 438 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 SQSTM1Q13501 440 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 TRA2AQ13595 282 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL6A1-205ENST00000492851 SKOR2Q2VWA4 1001 aaPredicted RBP12.41□□□□□ -0.42
COL6A1-205ENST00000492851 MAP9Q49MG5 647 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 KCTD16Q68DU8 428 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 NCBP2-AS2Q69YL0 99 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 ZNF605Q86T29 641 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 TSPAN33Q86UF1 283 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 VSIG1Q86XK7 387 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 CCNYQ8ND76 341 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 CCL4L1Q8NHW4 92 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 CCHCR1Q8TD31 782 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 FAF2Q96CS3 445 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 HDAC11Q96DB2 347 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 LYSMD1Q96S90 227 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 MAK16Q9BXY0 300 aaKnown RBP12.41□□□□□ -0.42
COL6A1-205ENST00000492851 ABCG8Q9H221 673 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 PCDH9Q9HC56 1237 aa12.41□□□□□ -0.42
COL6A1-205ENST00000492851 ANKRD66B4E2M5 251 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 B4GAT1O43505 415 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 MFSD11O43934 449 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 AKR1B10O60218 316 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 ECEL1O95672 775 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 FUCA1P04066 466 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 TMEM253P0C7T8 217 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 LIPCP11150 499 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 ZFXP17010 805 aaPredicted RBP12.4□□□□□ -0.42
COL6A1-205ENST00000492851 STC1P52823 247 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 GPLD1P80108 840 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 CTBSQ01459 385 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 ZSCAN23Q3MJ62 389 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 ATP13A4Q4VNC1 1196 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 ODF2Q5BJF6 829 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 PHF19Q5T6S3 580 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 SLC30A9Q6PML9 568 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 NYAP1Q6ZVC0 841 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 NRROSQ86YC3 692 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 GALNT13Q8IUC8 556 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 CCDC13Q8IYE1 715 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 PELI3Q8N2H9 469 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 ZSCAN1Q8NBB4 408 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 CCDC112Q8NEF3 446 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.4□□□□□ -0.42
COL6A1-205ENST00000492851 RNF157Q96PX1 679 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 OR2M4Q96R27 311 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 SRPK1Q96SB4 655 aaKnown RBP12.4□□□□□ -0.42
COL6A1-205ENST00000492851 MLPHQ9BV36 600 aaPredicted RBP12.4□□□□□ -0.42
COL6A1-205ENST00000492851 TDRD1Q9BXT4 1180 aaKnown RBP12.4□□□□□ -0.42
COL6A1-205ENST00000492851 BRD8Q9H0E9 1235 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 STN1Q9H668 368 aaKnown RBP12.4□□□□□ -0.42
COL6A1-205ENST00000492851 RAD18Q9NS91 495 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 PKD2L2Q9NZM6 624 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 VPS18Q9P253 973 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 PISDQ9UG56 409 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 NENFQ9UMX5 172 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 CHKBQ9Y259 395 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 TTLL3Q9Y4R7 772 aa12.4□□□□□ -0.42
COL6A1-205ENST00000492851 SLC2A4P14672 509 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 KDELR1P24390 212 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 ACTR1BP42025 376 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 POLD2P49005 469 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 ACTR1AP61163 376 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 AMZ1Q400G9 498 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 PYCR3Q53H96 274 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 BZW1Q7L1Q6 419 aaKnown RBP12.39□□□□□ -0.43
COL6A1-205ENST00000492851 SLITRK4Q8IW52 837 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 RHOT2Q8IXI1 618 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 AVL9Q8NBF6 648 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 OR4D9Q8NGE8 314 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 ARRDC2Q8TBH0 407 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 SH3KBP1Q96B97 665 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 COX14Q96I36 57 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 CCDC42Q96M95 316 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 XPO4Q9C0E2 1151 aaKnown RBP12.39□□□□□ -0.43
COL6A1-205ENST00000492851 FAM83DQ9H4H8 585 aa12.39□□□□□ -0.43
COL6A1-205ENST00000492851 SUDS3Q9H7L9 328 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms