RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 PARD6AQ9NPB6 346 aa16.68■□□□□ 0.26
SFXN5-220ENST00000490056 KCTD5Q9NXV2 234 aa16.68■□□□□ 0.26
SFXN5-220ENST00000490056 ANAPC5Q9UJX4 755 aa16.68■□□□□ 0.26
SFXN5-220ENST00000490056 PKP3Q9Y446 797 aa16.68■□□□□ 0.26
SFXN5-220ENST00000490056 OR1A2Q9Y585 309 aa16.68■□□□□ 0.26
SFXN5-220ENST00000490056 ZFHX2Q9C0A1 2572 aaPredicted RBP16.68■□□□□ 0.26
SFXN5-220ENST00000490056 ADAMTS9Q9P2N4 1935 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 RGSL1A5PLK6 1076 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 CCL22O00626 93 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 VILLO15195 856 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 SEC31AO94979 1220 aaKnown RBP16.67■□□□□ 0.26
SFXN5-220ENST00000490056 SOD1P00441 154 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 THEGLP0DJG4 465 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 NPY2RP49146 381 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 ZNF140P52738 457 aaPredicted RBP16.67■□□□□ 0.26
SFXN5-220ENST00000490056 PFN3P60673 137 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 DPTQ07507 201 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 TEAD4Q15561 434 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 TRADDQ15628 312 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 TPRG1LQ5T0D9 272 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 HENMT1Q5T8I9 393 aaKnown RBP16.67■□□□□ 0.26
SFXN5-220ENST00000490056 RAET1GQ6H3X3 334 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 HIBCHQ6NVY1 386 aaPredicted RBP16.67■□□□□ 0.26
SFXN5-220ENST00000490056 ESRP1Q6NXG1 681 aaKnown RBP16.67■□□□□ 0.26
SFXN5-220ENST00000490056 SLC23A3Q6PIS1 610 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 KYAT3Q6YP21 454 aaKnown RBP16.67■□□□□ 0.26
SFXN5-220ENST00000490056 PCGF5Q86SE9 256 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 MPP5Q8N3R9 675 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 RUBCNQ92622 972 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 DNAJC1Q96KC8 554 aaKnown RBP16.67■□□□□ 0.26
SFXN5-220ENST00000490056 PWWP2AQ96N64 755 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 SERPINB12Q96P63 405 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 APOOQ9BUR5 198 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 SPATA16Q9BXB7 569 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 CAPN10Q9HC96 672 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 IL26Q9NPH9 171 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 SYBUQ9NX95 663 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 BFARQ9NZS9 450 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 SLC6A14Q9UN76 642 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 ANKRD6Q9Y2G4 727 aa16.67■□□□□ 0.26
SFXN5-220ENST00000490056 MROH6A6NGR9 719 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 TLR4O00206 839 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 TP73O15350 636 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 ZNF806P0C7X5 589 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 ADRA1DP25100 572 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 TRIM23P36406 574 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 GPR1P46091 355 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 C21orf59P57076 290 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 KIF19Q2TAC6 998 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 PCID2Q5JVF3 399 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 RABEPKQ7Z6M1 372 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 IQCHQ86VS3 1027 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 HOOK3Q86VS8 718 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 NLRP8Q86W28 1048 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 SPATS2Q86XZ4 545 aaKnown RBP16.66■□□□□ 0.26
SFXN5-220ENST00000490056 RAVER1Q8IY67 606 aaKnown RBP16.66■□□□□ 0.26
SFXN5-220ENST00000490056 FUBP1Q96AE4 644 aaKnown RBP16.66■□□□□ 0.26
SFXN5-220ENST00000490056 ZNF778Q96MU6 729 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 RANBP9Q96S59 729 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 LGR4Q9BXB1 951 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 XAB2Q9HCS7 855 aaKnown RBP16.66■□□□□ 0.26
SFXN5-220ENST00000490056 RAD18Q9NS91 495 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 SEMA4GQ9NTN9 838 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 SLC2A6Q9UGQ3 507 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 FKBPLQ9UIM3 349 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 UTP11Q9Y3A2 253 aaKnown RBP16.66■□□□□ 0.26
SFXN5-220ENST00000490056 TCAF1Q9Y4C2 921 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 SNX11Q9Y5W9 270 aa16.66■□□□□ 0.26
SFXN5-220ENST00000490056 CACNA1EQ15878 2313 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 EP300Q09472 2414 aaPredicted RBP16.65■□□□□ 0.26
SFXN5-220ENST00000490056 HEATR9A2RTY3 570 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 FADS2P1A8MWK0 482 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 AP3B1O00203 1094 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 GAPDHSO14556 408 aaPredicted RBP16.65■□□□□ 0.26
SFXN5-220ENST00000490056 KHNYNO15037 678 aaKnown RBP16.65■□□□□ 0.26
SFXN5-220ENST00000490056 INPP4BO15327 924 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 BANF1O75531 89 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 MLNP12872 115 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 TSHRP16473 764 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 TGM1P22735 817 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 SPAM1P38567 509 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 RABIFP47224 123 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 NXPH1P58417 271 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 DCDC1P59894 354 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 PDE1BQ01064 536 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 MORF4L2Q15014 288 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 CHRNA6Q15825 494 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 PRAMEF14Q5SWL7 426 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 FNBP1LQ5T0N5 605 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 TSTD2Q5T7W7 516 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 FAM151BQ6UXP7 276 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 SLC22A18ASQ8N1D0 253 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 AGGF1Q8N302 714 aaeCLIP16.65■□□□□ 0.26
SFXN5-220ENST00000490056 PPHLN1Q8NEY8 458 aaKnown RBP16.65■□□□□ 0.26
SFXN5-220ENST00000490056 OR2I1PQ8NGU4 316 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 STYXQ8WUJ0 223 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 NUSAP1Q9BXS6 441 aaKnown RBP16.65■□□□□ 0.26
SFXN5-220ENST00000490056 IL22Q9GZX6 179 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 RAB17Q9H0T7 212 aa16.65■□□□□ 0.26
SFXN5-220ENST00000490056 CAAP1Q9H8G2 361 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms