RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 COPEO14579 308 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 SYNCRIPO60506 623 aaKnown RBP21.59■■□□□ 1.05
SMC4-221ENST00000489573 PRSS56P0CW18 603 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 PSMD8P48556 350 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 METAP1P53582 386 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 CACNG1Q06432 222 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 AARS2Q5JTZ9 985 aaKnown RBP21.59■■□□□ 1.05
SMC4-221ENST00000489573 FAM46CQ5VWP2 391 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 TCF12Q99081 682 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 CAPS2Q9BXY5 557 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 INTS10Q9NVR2 710 aaKnown RBP21.59■■□□□ 1.05
SMC4-221ENST00000489573 SLC39A10Q9ULF5 831 aa21.59■■□□□ 1.05
SMC4-221ENST00000489573 SCN8AQ9UQD0 1980 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 RRP9O43818 475 aaKnown RBP21.58■■□□□ 1.05
SMC4-221ENST00000489573 SRP72O76094 671 aaKnown RBP21.58■■□□□ 1.05
SMC4-221ENST00000489573 PRAMEF1O95521 474 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 NTSR1P30989 418 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 MMP12P39900 470 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 GUCY1A3Q02108 690 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 RALGDSQ12967 914 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 C2orf27AQ580R0 203 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 IER5LQ5T953 404 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 ZDHHC20Q5W0Z9 365 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 SDE2Q6IQ49 451 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 PSAPL1Q6NUJ1 521 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 FBXL19Q6PCT2 694 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 FAM151BQ6UXP7 276 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 TRMT11Q7Z4G4 463 aaKnown RBP21.58■■□□□ 1.05
SMC4-221ENST00000489573 CMC1Q7Z7K0 106 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 PNPLA1Q8N8W4 532 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 GPATCH11Q8N954 259 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 ACVR1CQ8NER5 493 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 MGARPQ8TDB4 240 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.58■■□□□ 1.052e-13■■■■■ 56.3
SMC4-221ENST00000489573 ELMO2Q96JJ3 720 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 CABS1Q96KC9 395 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 GABRG3Q99928 467 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 CAB39LQ9H9S4 337 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 IL26Q9NPH9 171 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 INTS9Q9NV88 658 aaKnown RBP21.58■■□□□ 1.05
SMC4-221ENST00000489573 PKD2L2Q9NZM6 624 aa21.58■■□□□ 1.05
SMC4-221ENST00000489573 CORO1CQ9ULV4 474 aaPredicted RBP21.58■■□□□ 1.05
SMC4-221ENST00000489573 GLYATL1P3A0A0U1RQE8 302 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 GAPDHSO14556 408 aaPredicted RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 PFDN6O15212 129 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 ZWINTO95229 277 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 ITGALP20701 1170 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 RPA3P35244 121 aaPredicted RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 SUOXP51687 545 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 NEK3P51956 506 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 USP10Q14694 798 aaKnown RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 RNF187Q5TA31 235 aaPredicted RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 SLC41A1Q8IVJ1 513 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 PIANPQ8IYJ0 282 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 ERLEC1Q96DZ1 483 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 RSPH9Q9H1X1 276 aaPredicted RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 FAM96AQ9H5X1 160 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 VPS9D1Q9Y2B5 631 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 ZNF106Q9H2Y7 1883 aaKnown RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 A6NNZ2 444 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 TM9SF1O15321 606 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 RNASEH1O60930 286 aaKnown RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 NDUFS3O75489 264 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 MPOP05164 745 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 ADRB3P13945 408 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 SPINT3P49223 89 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 TTPAP49638 278 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 CDKN1CP49918 316 aaPredicted RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 MRPS21P82921 87 aaKnown RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 POU4F1Q01851 419 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 TFF2Q03403 129 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 ELP6Q0PNE2 266 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 PDE1CQ14123 709 aaPredicted RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 STARD3Q14849 445 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 TUBB8Q3ZCM7 444 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 RBM20Q5T481 1227 aaKnown RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 ERN2Q76MJ5 926 aaKnown RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 TAS2R42Q7RTR8 314 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 SNX20Q7Z614 316 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 IL17RCQ8NAC3 791 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 GPR26Q8NDV2 337 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 TCP10LQ8TDR4 215 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 DENND1AQ8TEH3 1009 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 FAM3CQ92520 227 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 PLEKHG4BQ96PX9 1271 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 SLC13A1Q9BZW2 595 aa21.57■■□□□ 1.04
SMC4-221ENST00000489573 IQCGQ9H095 443 aaKnown RBP21.57■■□□□ 1.04
SMC4-221ENST00000489573 KLF8O95600 359 aaPredicted RBP21.56■■□□□ 1.04
SMC4-221ENST00000489573 SAT1P21673 171 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 GNGT1P63211 74 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 SLC44A4Q53GD3 710 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 TTC19Q6DKK2 380 aaPredicted RBP21.56■■□□□ 1.04
SMC4-221ENST00000489573 CERS6Q6ZMG9 384 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 LPGAT1Q92604 370 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 CENPTQ96BT3 561 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 NDNQ99608 321 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 OMDQ99983 421 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 HDAC8Q9BY41 377 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 VPS11Q9H270 941 aa21.56■■□□□ 1.04
SMC4-221ENST00000489573 ASB8Q9H765 288 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms