RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 IGFBP7Q16270 282 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 TSPAN33Q86UF1 283 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 ZNF761Q86XN6 746 aaPredicted RBP19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 NRSN1Q8IZ57 195 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 PGBD5Q8N414 524 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 NUDCD1Q96RS6 583 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 ZMYND15Q9H091 742 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 NOD2Q9HC29 1040 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 PDP2Q9P2J9 529 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 ANAPC2Q9UJX6 822 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 FLNCQ14315 2725 aa19.37■□□□□ 0.69
SMPDL3A-202ENST00000487215 CAPN5O15484 640 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 ATMINO43313 823 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 DUX1O43812 170 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 TNFAIP3P21580 790 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 NFKBIAP25963 317 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 HSPA9P38646 679 aaKnown RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 GPR1P46091 355 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 FASLGP48023 281 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 DPTQ07507 201 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 DPYSQ14117 519 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 RFLNAQ6ZTI6 216 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 TECPR1Q7Z6L1 1165 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 C9orf43Q8TAL5 461 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 SLC37A2Q8TED4 501 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 RTP4Q96DX8 246 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 SCRN2Q96FV2 425 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 TEFMQ96QE5 360 aaKnown RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 MCCC1Q96RQ3 725 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 MGME1Q9BQP7 344 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 SPRY4Q9C004 299 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 GPN2Q9H9Y4 310 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 ZNF71Q9NQZ8 489 aaPredicted RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 PARVAQ9NVD7 372 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 FANCLQ9NW38 375 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 CWC15Q9P013 229 aaKnown RBP19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 TMEM98Q9Y2Y6 226 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 DOPEY2Q9Y3R5 2298 aa19.36■□□□□ 0.69
SMPDL3A-202ENST00000487215 LGALS16A8MUM7 142 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 PRPSAP2O60256 369 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 PRKAR1AP10644 381 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 MIPP30301 263 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 HCAR3P49019 387 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 CDC20Q12834 499 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 PLEKHA7Q6IQ23 1121 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 TRIM74Q86UV6 250 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 NLGN4XQ8N0W4 816 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 LZTR1Q8N653 840 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 NLGN4YQ8NFZ3 816 aaPredicted RBP19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 FNIP1Q8TF40 1166 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 AHCYL2Q96HN2 611 aaKnown RBP19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 SLC38A3Q99624 504 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 CTRCQ99895 268 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 TRIM7Q9C029 511 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 CD84Q9UIB8 345 aa19.35■□□□□ 0.69
SMPDL3A-202ENST00000487215 RELNP78509 3460 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 TRBV23OR9-2A0A075B6M9 112 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 A0A0U1RQS6 177 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 LOC101059948A0A1B0GTJ6 334 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 CLEC18AA5D8T8 446 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 TMCO5BA8MYB1 307 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 RNF8O76064 485 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 PGLSO95336 258 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 CTPS1P17812 591 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 MAP4P27816 1152 aaKnown RBP19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 PPM1FP49593 454 aaPredicted RBP19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 ZNF135P52742 658 aaPredicted RBP19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 MAXP61244 160 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 MC2RQ01718 297 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 PYCR3Q53H96 274 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 SNAP47Q5SQN1 464 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 CLEC18BQ6UXF7 455 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 ADAMTSL4Q6UY14 1074 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 USP45Q70EL2 814 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 MARK2Q7KZI7 788 aaKnown RBP19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 TIPARPQ7Z3E1 657 aaKnown RBP19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 LURAP1LQ8IV03 231 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 PSTKQ8IV42 348 aaKnown RBP19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 UNC5BQ8IZJ1 945 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 SFRP1Q8N474 314 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 CLEC18CQ8NCF0 446 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 OR10G6Q8NH81 332 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 KIAA1143Q96AT1 154 aaPredicted RBP19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 SYT11Q9BT88 431 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 ABCG8Q9H221 673 aa19.34■□□□□ 0.69
SMPDL3A-202ENST00000487215 TMEM191CA6NGB0 347 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 A8MU76 341 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 MAP3K6O95382 1288 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 EML2O95834 649 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 NTRK1P04629 796 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 GP1BBP13224 206 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 FERP16591 822 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 OAS2P29728 719 aaKnown RBP19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 UBXN1Q04323 297 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 LRP8Q14114 963 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 ARMC12Q5T9G4 340 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 ARHGAP22Q7Z5H3 698 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 AP2M1Q96CW1 435 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 ERGIC2Q96RQ1 377 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms