RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 APRTP07741 180 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 ZNF883P0CG24 379 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 HTR1BP28222 390 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 PAFAH1B1P43034 410 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 FNTAP49354 379 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 KIAA1024LP59773 190 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 DPTQ07507 201 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 BNIP3Q12983 259 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 GPS1Q13098 491 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 EIF2B5Q13144 721 aaKnown RBP11.8□□□□□ -0.52
HPS4-214ENST00000485842 SEMA5AQ13591 1074 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 SEPT6Q14141 434 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 SHBQ15464 509 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 DENND5AQ6IQ26 1287 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 DOK6Q6PKX4 331 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 ENPP7Q6UWV6 458 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 PPP1R21Q6ZMI0 780 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 NYAP1Q6ZVC0 841 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 RD3Q7Z3Z2 195 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 TMC3Q7Z5M5 1100 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 LINC00523Q86TU6 105 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 TRIM74Q86UV6 250 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 RBFAQ8N0V3 343 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 DNAAF3Q8N9W5 541 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 GPR26Q8NDV2 337 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 OR52K1Q8NGK4 314 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 WDR92Q96MX6 357 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 LGR4Q9BXB1 951 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 SPATA16Q9BXB7 569 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 DDX47Q9H0S4 455 aaKnown RBP11.8□□□□□ -0.52
HPS4-214ENST00000485842 TRABDQ9H4I3 376 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 PHPT1Q9NRX4 125 aaPredicted RBP11.8□□□□□ -0.52
HPS4-214ENST00000485842 RAD18Q9NS91 495 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 KLQ9UEF7 1012 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 MOSPD1Q9UJG1 213 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 LRP4O75096 1905 aa11.8□□□□□ -0.52
HPS4-214ENST00000485842 RGSL1A5PLK6 1076 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 H3BM21 787 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 PDE2AO00408 941 aaPredicted RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 SCAMP1O15126 338 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 INPP4BO15327 924 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 STX7O15400 261 aaKnown RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 ECEL1O95672 775 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 SOD1P00441 154 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 MYCLP1P12525 358 aaPredicted RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 CD59P13987 128 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 NME1P15531 152 aaKnown RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 BPIP17213 487 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 TPH1P17752 444 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 SDHBP21912 280 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 KELP23276 732 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 HMGCLP35914 325 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 TRIM23P36406 574 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 DCDC1P59894 354 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 CDK3Q00526 305 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 POU6F1Q14863 301 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 SUZ12Q15022 739 aaKnown RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 TCEA2Q15560 299 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 HENMT1Q5T8I9 393 aaKnown RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 C4orf22Q6V702 233 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 HID1Q8IV36 788 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 NAXDQ8IW45 347 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 KLHL7Q8IXQ5 586 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 RAVER1Q8IY67 606 aaKnown RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 PHACTR4Q8IZ21 702 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 GRK7Q8WTQ7 553 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 SETD7Q8WTS6 366 aaKnown RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 TSACCQ96A04 125 aaPredicted RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 TCEAL2Q9H3H9 227 aaPredicted RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 SUDS3Q9H7L9 328 aaPredicted RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 ARNT2Q9HBZ2 717 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.79□□□□□ -0.52
HPS4-214ENST00000485842 APOBEC3BQ9UH17 382 aaKnown RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 FEZ2Q9UHY8 353 aaPredicted RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 PNMA8BQ9ULN7 279 aaPredicted RBP11.79□□□□□ -0.52
HPS4-214ENST00000485842 PKP3Q9Y446 797 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 KCTD3Q9Y597 815 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 ARL5AQ9Y689 179 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 CABIN1Q9Y6J0 2220 aa11.79□□□□□ -0.52
HPS4-214ENST00000485842 LAMA1P25391 3075 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 CCDC78A2IDD5 438 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 DCDC2BA2VCK2 349 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 TMEM202A6NGA9 273 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 C2orf81A6NN90 581 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 FADS2P1A8MWK0 482 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 SH3BP5O60239 455 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 PIAS2O75928 621 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 CRTAMO95727 393 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 CSF2P04141 144 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 PYGLP06737 847 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 JUNDP17535 347 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 LPOP22079 712 aaPredicted RBP11.78□□□□□ -0.52
HPS4-214ENST00000485842 TEAD1P28347 426 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 SPAM1P38567 509 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 GRIA1P42261 906 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 RXRGP48443 463 aa11.78□□□□□ -0.52
HPS4-214ENST00000485842 SRP54P61011 504 aaKnown RBP11.78□□□□□ -0.52
HPS4-214ENST00000485842 HNRNPKP61978 463 aaKnown RBP eCLIP11.78□□□□□ -0.52
HPS4-214ENST00000485842 TMPRSS15P98073 1019 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms