RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 TP53I13Q8NBR0 393 aaPredicted RBP15.29■□□□□ 0.04
CCM2-215ENST00000482714 TMEM145Q8NBT3 493 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 OR4K2Q8NGD2 314 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 C1orf216Q8TAB5 229 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 CEP76Q8TAP6 659 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 EBNA1BP2Q99848 306 aaKnown RBP15.29■□□□□ 0.04
CCM2-215ENST00000482714 ZSCAN5AQ9BUG6 496 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 EBF2Q9HAK2 575 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 CHRAC1Q9NRG0 131 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 ZDHHC18Q9NUE0 388 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 EIF2B4Q9UI10 523 aaKnown RBP15.29■□□□□ 0.04
CCM2-215ENST00000482714 FANCMQ8IYD8 2048 aa15.29■□□□□ 0.04
CCM2-215ENST00000482714 USP1O94782 785 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 POLBP06746 335 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 RHOXF2BP0C7M4 288 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 PAMP19021 973 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 MCM3P25205 808 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 SPAM1P38567 509 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 NBL1P41271 181 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 PTGER3P43115 390 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 ITGA9Q13797 1035 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 TRADDQ15628 312 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 GPR33Q49SQ1 333 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 FNBP1LQ5T0N5 605 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 HENMT1Q5T8I9 393 aaKnown RBP15.28■□□□□ 0.04
CCM2-215ENST00000482714 CASC4Q6P4E1 433 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 ABI3BPQ7Z7G0 1075 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 RELL1Q8IUW5 271 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 GPR26Q8NDV2 337 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 ATOH1Q92858 354 aaPredicted RBP15.28■□□□□ 0.04
CCM2-215ENST00000482714 STAMBPL1Q96FJ0 436 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 SERAC1Q96JX3 654 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 RHOXF2Q9BQY4 288 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 IL26Q9NPH9 171 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 TREX1Q9NSU2 369 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 PIH1D1Q9NWS0 290 aaKnown RBP15.28■□□□□ 0.04
CCM2-215ENST00000482714 PILRBQ9UKJ0 227 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 SPAG17Q6Q759 2223 aa15.28■□□□□ 0.04
CCM2-215ENST00000482714 A0A1B0GTW7 788 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 AGAP14A8MT82 685 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 BCAT2O15382 392 aaPredicted RBP15.27■□□□□ 0.04
CCM2-215ENST00000482714 TNFRSF8P28908 595 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 PLA2G5P39877 138 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 RABIFP47224 123 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 DHX9Q08211 1270 aaKnown RBP15.27■□□□□ 0.04
CCM2-215ENST00000482714 SEPT6Q14141 434 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 LAIR1Q6GTX8 287 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 PRR23BQ6ZRT6 265 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 CYS1Q717R9 158 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 LMNTD2Q8IXW0 634 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 DEFB119Q8N690 84 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 LRRN4CLQ8ND94 238 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 SCG3Q8WXD2 468 aaKnown RBP15.27■□□□□ 0.04
CCM2-215ENST00000482714 IFT81Q8WYA0 676 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 KLK6Q92876 244 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 BMFQ96LC9 184 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 SYBUQ9NX95 663 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 COQ6Q9Y2Z9 468 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 TEX264Q9Y6I9 313 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 FAM169AQ9Y6X4 670 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 THADAQ6YHU6 1953 aa15.27■□□□□ 0.04
CCM2-215ENST00000482714 GLYATL1P3A0A0U1RQE8 302 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 ESYT3A0FGR9 886 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 GSTA2P09210 222 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 PGAM1P18669 254 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 CD38P28907 300 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 GPR1P46091 355 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 AFF3P51826 1226 aaKnown RBP15.27■□□□□ 0.03
CCM2-215ENST00000482714 PFN3P60673 137 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 XIAPP98170 497 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 PDIA2Q13087 525 aaKnown RBP15.27■□□□□ 0.03
CCM2-215ENST00000482714 PTK2BQ14289 1009 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 FRG1Q14331 258 aaKnown RBP15.27■□□□□ 0.03
CCM2-215ENST00000482714 HLTFQ14527 1009 aaKnown RBP eCLIP15.27■□□□□ 0.03
CCM2-215ENST00000482714 TEAD4Q15561 434 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 BBS9Q3SYG4 887 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 CCDC38Q502W7 563 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 ADAMTSL4Q6UY14 1074 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 KYAT3Q6YP21 454 aaKnown RBP15.27■□□□□ 0.03
CCM2-215ENST00000482714 SNX20Q7Z614 316 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 OR13J1Q8NGT2 312 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 GABPB2Q8TAK5 448 aaPredicted RBP15.27■□□□□ 0.03
CCM2-215ENST00000482714 ZNF398Q8TD17 642 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 SNX19Q92543 992 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 SCAMP4Q969E2 229 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 FAM122AQ96E09 287 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 KLHDC7BQ96G42 594 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 VPS35Q96QK1 796 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 FMO2Q99518 471 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 TTC1Q99614 292 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 HINFPQ9BQA5 517 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 RIOK2Q9BVS4 552 aaKnown RBP15.27■□□□□ 0.03
CCM2-215ENST00000482714 TEX101Q9BY14 249 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 BPIFA1Q9NP55 256 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 MBNL1Q9NR56 388 aaKnown RBP15.27■□□□□ 0.03
CCM2-215ENST00000482714 KCTD3Q9Y597 815 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 MAD1L1Q9Y6D9 718 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 R4GN57 208 aa15.27■□□□□ 0.03
CCM2-215ENST00000482714 A0A0U1RQS6 177 aa15.26■□□□□ 0.03
CCM2-215ENST00000482714 A6NNZ2 444 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms