RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CCNB1P14635 433 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 MX2P20592 715 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CA4P22748 312 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CES1P23141 567 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CCNCP24863 283 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 TEAD1P28347 426 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CYLC1P35663 651 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 GPR1P46091 355 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 GNPDA1P46926 289 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 INHBCP55103 352 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 TAS2R40P59535 323 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 DSC2Q02487 901 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 HLTFQ14527 1009 aaKnown RBP eCLIP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 LRRC66Q68CR7 880 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 ALG1LQ6GMV1 187 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 SPRED1Q7Z699 444 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 SFTPA2Q8IWL1 248 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CCDC170Q8IYT3 715 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 Q8N9G6 341 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 FATE1Q969F0 183 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 FAF2Q96CS3 445 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 TMEM74Q96NL1 305 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CHP1Q99653 195 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 TDRD1Q9BXT4 1180 aaKnown RBP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 FOXP3Q9BZS1 431 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 RBM22Q9NW64 420 aaKnown RBP eCLIP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 LRIT1Q9P2V4 623 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 CD84Q9UIB8 345 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 APPL1Q9UKG1 709 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 SUFUQ9UMX1 484 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 ADGRG1Q9Y653 693 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 EPN1Q9Y6I3 576 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-218ENST00000479554 RNF215Q9Y6U7 377 aa14.3□□□□□ -0.12
ATG4B-218ENST00000479554 A0A0J9YYE9 177 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 A0A0U1RQS6 177 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 SSU72P8A0A1W2PR75 194 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 ATXN7O15265 892 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-218ENST00000479554 NUDT21O43809 227 aaKnown RBP14.29□□□□□ -0.12
ATG4B-218ENST00000479554 AKR1B10O60218 316 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 TRBC1P01850 177 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 TMEM253P0C7T8 217 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 PNLIPP16233 465 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 ZNF30P17039 623 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 CCKBRP32239 447 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 MAN1A1P33908 653 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 SKOR1P84550 965 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 GBE1Q04446 702 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 DPTQ07507 201 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 DOK6Q6PKX4 331 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 RAB11FIP2Q7L804 512 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 TECPR1Q7Z6L1 1165 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 REXO1L1PQ8IX06 675 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 FBXO39Q8N4B4 442 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 PQLC3Q8N755 202 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 GPBAR1Q8TDU6 330 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 ZDHHC1Q8WTX9 485 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 HDAC11Q96DB2 347 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 TSGA13Q96PP4 275 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 CPNE5Q9HCH3 593 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 TRNAU1APQ9NX07 287 aaKnown RBP14.29□□□□□ -0.12
ATG4B-218ENST00000479554 DNPEPQ9ULA0 475 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 ATXN7L1Q9ULK2 861 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-218ENST00000479554 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
ATG4B-218ENST00000479554 CAPN8A6NHC0 703 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 NDUFA10O95299 355 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 HLA-DQB2P05538 268 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 IVLP07476 585 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 TNNT1P13805 278 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 POLD2P49005 469 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 MAZP56270 477 aaKnown RBP14.28□□□□□ -0.12
ATG4B-218ENST00000479554 MESDQ14696 234 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 ASTE1Q2TB18 679 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-218ENST00000479554 SLC30A9Q6PML9 568 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 ADAMTSL4Q6UY14 1074 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 RFLNAQ6ZTI6 216 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 ZNF765Q7L2R6 523 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 NRROSQ86YC3 692 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 CCDC13Q8IYE1 715 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 CCNYQ8ND76 341 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 SLC39A7Q92504 469 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 AP2M1Q96CW1 435 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 C16orf45Q96MC5 204 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-218ENST00000479554 SMIM14Q96QK8 99 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 DESI2Q9BSY9 194 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 CDH19Q9H159 772 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 ABCG8Q9H221 673 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 NHEJ1Q9H9Q4 299 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-218ENST00000479554 SPATS2LQ9NUQ6 558 aaKnown RBP14.28□□□□□ -0.12
ATG4B-218ENST00000479554 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 TAAR2Q9P1P5 351 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 SLC17A4Q9Y2C5 497 aa14.28□□□□□ -0.12
ATG4B-218ENST00000479554 LRRD1A4D1F6 860 aa14.27□□□□□ -0.13
ATG4B-218ENST00000479554 RHPN2P1A8MT19 583 aa14.27□□□□□ -0.13
ATG4B-218ENST00000479554 TK2O00142 265 aa14.27□□□□□ -0.13
ATG4B-218ENST00000479554 IPO7O95373 1038 aaKnown RBP14.27□□□□□ -0.13
ATG4B-218ENST00000479554 SOD1P00441 154 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms