RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ANKS6Q68DC2 871 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 Q6ZVL8 140 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 MARK2Q7KZI7 788 aaKnown RBP13.95□□□□□ -0.18
CCDC78-209ENST00000474647 TSPAN33Q86UF1 283 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 TRIM74Q86UV6 250 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 ANKRD20A12PQ8NF67 263 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 FNIP1Q8TF40 1166 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 OR2M4Q96R27 311 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 EIF3CQ99613 913 aaKnown RBP13.95□□□□□ -0.18
CCDC78-209ENST00000474647 ASPSCR1Q9BZE9 553 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 PARVAQ9NVD7 372 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 FANCLQ9NW38 375 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 KCTD5Q9NXV2 234 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 PHTF1Q9UMS5 762 aa13.95□□□□□ -0.18
CCDC78-209ENST00000474647 A0A0U1RQS6 177 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 A0A1W2PQ67 120 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 IVLP07476 585 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 TNFAIP3P21580 790 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 MIPP30301 263 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 RAB15P59190 212 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 TRAF2Q12933 501 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 MAMLD1Q13495 774 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 PGBD5Q8N414 524 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 KIAA1143Q96AT1 154 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-209ENST00000474647 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 NUDCD1Q96RS6 583 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 SLC38A3Q99624 504 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 CTRCQ99895 268 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 ZWILCHQ9H900 591 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 GPN2Q9H9Y4 310 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-209ENST00000474647 NOD2Q9HC29 1040 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 ZNF71Q9NQZ8 489 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-209ENST00000474647 ANKMY1Q9P2S6 941 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 SLC17A4Q9Y2C5 497 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 TMEM98Q9Y2Y6 226 aa13.94□□□□□ -0.18
CCDC78-209ENST00000474647 LGALS16A8MUM7 142 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 HTRA2O43464 458 aaPredicted RBP13.93□□□□□ -0.18
CCDC78-209ENST00000474647 DUX1O43812 170 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 CCDC172P0C7W6 258 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 FERP16591 822 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 HSPA9P38646 679 aaKnown RBP13.93□□□□□ -0.18
CCDC78-209ENST00000474647 MAPK9P45984 424 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 GPLD1P80108 840 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 DPYSQ14117 519 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 IGFBP7Q16270 282 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 SMTNL2Q2TAL5 461 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 TMEM71Q6P5X7 295 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 USP45Q70EL2 814 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 GALNT13Q8IUC8 556 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 BBS5Q8N3I7 341 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 ATPAF2Q8N5M1 289 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 ARFGAP1Q8N6T3 406 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 OR10G6Q8NH81 332 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 C9orf43Q8TAL5 461 aaPredicted RBP13.93□□□□□ -0.18
CCDC78-209ENST00000474647 SLC37A2Q8TED4 501 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 AP2M1Q96CW1 435 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 CATSPER2Q96P56 530 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 DPYSL5Q9BPU6 564 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 CWC15Q9P013 229 aaKnown RBP13.93□□□□□ -0.18
CCDC78-209ENST00000474647 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
CCDC78-209ENST00000474647 B4E171 279 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 H3BRJ5 948 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 PSMD11O00231 422 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 NKX2-8O15522 239 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 MAP3K6O95382 1288 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 CR2P20023 1033 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 ARL4AP40617 200 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 TSPAN7P41732 249 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 CDC20Q12834 499 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 UBAP2LQ14157 1087 aaKnown RBP13.92□□□□□ -0.18
CCDC78-209ENST00000474647 ARMC12Q5T9G4 340 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 LRRC66Q68CR7 880 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 PLEKHA7Q6IQ23 1121 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 TMCO3Q6UWJ1 677 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 RFLNAQ6ZTI6 216 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 CYP4V2Q6ZWL3 525 aaPredicted RBP13.92□□□□□ -0.18
CCDC78-209ENST00000474647 KDELC2Q7Z4H8 507 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 UNC5BQ8IZJ1 945 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 NLGN4XQ8N0W4 816 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 LZTR1Q8N653 840 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 NLGN4YQ8NFZ3 816 aaPredicted RBP13.92□□□□□ -0.18
CCDC78-209ENST00000474647 NSMCE1Q8WV22 266 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 RTP4Q96DX8 246 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 MGME1Q9BQP7 344 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 TRIM7Q9C029 511 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 KLHL3Q9UH77 587 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 PILRAQ9UKJ1 303 aa13.92□□□□□ -0.18
CCDC78-209ENST00000474647 LOC101059948A0A1B0GTJ6 334 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 INPP4BO15327 924 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 CAPN5O15484 640 aaPredicted RBP13.91□□□□□ -0.18
CCDC78-209ENST00000474647 LRCH4O75427 683 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 PGLSO95336 258 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 ASMTLO95671 621 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 SOD1P00441 154 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 CDK11BP21127 795 aaKnown RBP13.91□□□□□ -0.18
CCDC78-209ENST00000474647 AMPD1P23109 780 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 TEAD1P28347 426 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 MAN1A1P33908 653 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 CASRP41180 1078 aa13.91□□□□□ -0.18
CCDC78-209ENST00000474647 MMP13P45452 471 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms