RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF395Q9H8N7 513 aaPredicted RBP18.09■□□□□ 0.49
SMC4-211ENST00000469858 MTF2Q9Y483 593 aaPredicted RBP18.09■□□□□ 0.49
SMC4-211ENST00000469858 SLC30A1Q9Y6M5 507 aa18.09■□□□□ 0.49
SMC4-211ENST00000469858 G3V2L1 256 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 LEFTY1O75610 366 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 TROVE2P10155 538 aaKnown RBP eCLIP18.08■□□□□ 0.491e-12■■■■■ 61.2
SMC4-211ENST00000469858 FMO4P31512 558 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 TTPAP49638 278 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 FCHO2Q0JRZ9 810 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 TAS2R42Q7RTR8 314 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 HEXDCQ8WVB3 486 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 SCG3Q8WXD2 468 aaKnown RBP18.08■□□□□ 0.49
SMC4-211ENST00000469858 FAM136AQ96C01 138 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 GPR78Q96P69 363 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 LYSMD1Q96S90 227 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 AARSD1Q9BTE6 412 aaKnown RBP18.08■□□□□ 0.49
SMC4-211ENST00000469858 S1PR5Q9H228 398 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 CLDND1Q9NY35 253 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 GTSE1Q9NYZ3 720 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 KLHL14Q9P2G3 628 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 XPR1Q9UBH6 696 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 MID2Q9UJV3 735 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 PLA2G4CQ9UP65 541 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 WASF2Q9Y6W5 498 aa18.08■□□□□ 0.49
SMC4-211ENST00000469858 SRP72O76094 671 aaKnown RBP18.08■□□□□ 0.48
SMC4-211ENST00000469858 CCDC166P0CW27 439 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 MYL2P10916 166 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 FDXRP22570 491 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 CACNG1Q06432 222 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 ITGA9Q13797 1035 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 ARSIQ5FYB1 569 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 AARS2Q5JTZ9 985 aaKnown RBP18.08■□□□□ 0.48
SMC4-211ENST00000469858 RNF187Q5TA31 235 aaPredicted RBP18.08■□□□□ 0.48
SMC4-211ENST00000469858 LRRC66Q68CR7 880 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 NAIF1Q69YI7 327 aaPredicted RBP18.08■□□□□ 0.48
SMC4-211ENST00000469858 CRTC1Q6UUV9 634 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 TPRG1Q6ZUI0 275 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 CPA6Q8N4T0 437 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 CCDC68Q9H2F9 335 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 BRD9Q9H8M2 597 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 IGSF5Q9NSI5 407 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 VPS9D1Q9Y2B5 631 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 PPIL1Q9Y3C6 166 aa18.08■□□□□ 0.48
SMC4-211ENST00000469858 DENND4AQ7Z401 1863 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 TCF20Q9UGU0 1960 aaKnown RBP18.07■□□□□ 0.48
SMC4-211ENST00000469858 A0A1W2PQ67 120 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 PFDN6O15212 129 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 PRAMEF1O95521 474 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 IL1BP01584 269 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 SBK3P0C264 359 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 RALBP11234 206 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 BPIP17213 487 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 VASPP50552 380 aaPredicted RBP18.07■□□□□ 0.48
SMC4-211ENST00000469858 OCRLQ01968 901 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 RUNX3Q13761 415 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 FAM83EQ2M2I3 478 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 TMEM151AQ8N4L1 468 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 ANKRD49Q8WVL7 239 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 C7orf26Q96N11 449 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 MCCC1Q96RQ3 725 aaPredicted RBP18.07■□□□□ 0.48
SMC4-211ENST00000469858 TRIM55Q9BYV6 548 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 C20orf27Q9GZN8 174 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 IL36AQ9UHA7 158 aa18.07■□□□□ 0.48
SMC4-211ENST00000469858 MUC22E2RYF6 1773 aaPredicted RBP18.07■□□□□ 0.48
SMC4-211ENST00000469858 OR1I1O60431 355 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 SNNO75324 88 aaPredicted RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 SERPINE1P05121 402 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 CTSLP07711 333 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 LTA4HP09960 611 aaKnown RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 LAMP2P13473 410 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 PSMC3P17980 439 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 LHCGRP22888 699 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 KPNA2P52292 529 aaKnown RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 TIAL1Q01085 375 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMC4-211ENST00000469858 FNDC3BQ53EP0 1204 aaKnown RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 AGAP9Q5VTM2 703 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 BRAT1Q6PJG6 821 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 PARM1Q6UWI2 310 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 TMEM207Q6UWW9 146 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 SFTPA1Q8IWL2 248 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 RDH11Q8TC12 318 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 FGF14Q92915 247 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.06■□□□□ 0.482e-13■■■■■ 56.3
SMC4-211ENST00000469858 RMDN2Q96LZ7 410 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 THAP1Q9NVV9 213 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 DCTN4Q9UJW0 460 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 GAPDHSO14556 408 aaPredicted RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 RHOBTB1O94844 696 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 KIAA0754O94854 1291 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 WISP3O95389 354 aaPredicted RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 POLR2LP62875 67 aaKnown RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 PDAP1Q13442 181 aaKnown RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 ZYG11AQ6WRX3 759 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 TERB1Q8NA31 727 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 RFWD2Q8NHY2 731 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 C10orf82Q8WW14 230 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 SREK1Q8WXA9 508 aaKnown RBP18.06■□□□□ 0.48
SMC4-211ENST00000469858 UBXN10Q96LJ8 280 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 RIPOR3Q96MK2 946 aa18.06■□□□□ 0.48
SMC4-211ENST00000469858 MRPL46Q9H2W6 279 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms