RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 DDX4Q9NQI0 724 aaKnown RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 BARHL2Q9NY43 387 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 KIAA1456Q9P272 454 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 PAK5Q9P286 719 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 KIF17Q9P2E2 1029 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 TTC7AQ9ULT0 858 aaPredicted RBP2.11□□□□□ -2.07
LRCH3-209ENST00000452660 DNAJC16Q9Y2G8 782 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 C2CD2Q9Y426 696 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 ADAMTS9Q9P2N4 1935 aa2.11□□□□□ -2.07
LRCH3-209ENST00000452660 DISP3Q9P2K9 1392 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 SHROOM4Q9ULL8 1493 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ZCWPW2A0A1B0GU75 182 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 IPO5O00410 1097 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 PDE9AO76083 593 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 HOXB5P09067 269 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 BDKRB2P30411 391 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 AHRP35869 848 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 CLK1P49759 484 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 CHRNDQ07001 517 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TUBB2AQ13885 445 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ANKRD1Q15327 319 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TAF11Q15544 211 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF239Q16600 458 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TMEM35AQ53FP2 167 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 GPATCH4Q5T3I0 446 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 FAM53AQ6NSI3 398 aaPredicted RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TRIM65Q6PJ69 517 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 CPLX2Q6PUV4 134 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 MOB3CQ70IA8 216 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TRPT1Q86TN4 253 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 MYLK4Q86YV6 388 aaPredicted RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 KIAA2013Q8IYS2 634 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TNIP2Q8NFZ5 429 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 DUSP19Q8WTR2 217 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF473Q8WTR7 871 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 RND1Q92730 232 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 MOCOSQ96EN8 888 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ART5Q96L15 291 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF354BQ96LW1 612 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TUBB2BQ9BVA1 445 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 CDK19Q9BWU1 502 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 TAOK3Q9H2K8 898 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 KCNN2Q9H2S1 579 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 PDZD7Q9H5P4 517 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 STN1Q9H668 368 aaKnown RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 CCDC177Q9NQR7 707 aaPredicted RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 BABAM1Q9NWV8 329 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ADPRHL2Q9NX46 363 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 FBXO9Q9UK97 447 aaPredicted RBP2.1□□□□□ -2.07
LRCH3-209ENST00000452660 ACAD8Q9UKU7 415 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 OR2W1Q9Y3N9 320 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 PTPRCP08575 1304 aa2.1□□□□□ -2.07
LRCH3-209ENST00000452660 KIAA1210Q9ULL0 1709 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 STX16-NPEPL1H3BU86 382 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 H7C423 109 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 SH2B2O14492 632 aaPredicted RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 STX16O14662 325 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 PRC1O43663 620 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 IFIT2P09913 472 aaKnown RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 IRF1P10914 325 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 DPEP1P16444 411 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 CD72P21854 359 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 RIGQ13278 110 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 CUL4BQ13620 913 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 CTU2Q2VPK5 515 aaKnown RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 ZC2HC1CQ53FD0 456 aaPredicted RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 HSP90AB2PQ58FF8 381 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 TECRLQ5HYJ1 363 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 STXBP5Q5T5C0 1151 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 BSPRYQ5W0U4 402 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 C15orf39Q6ZRI6 1047 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 TADA2BQ86TJ2 420 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 ERC1Q8IUD2 1116 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 SPATA6LQ8N4H0 392 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 TRAPPC12Q8WVT3 735 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 RUBCNQ92622 972 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 ZNF653Q96CK0 615 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 ABHD8Q96I13 439 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 MTERF1Q99551 399 aaKnown RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 FAM110AQ9BQ89 295 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 CRB3Q9BUF7 120 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 UPF2Q9HAU5 1272 aaKnown RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 ZBTB20Q9HC78 741 aaPredicted RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 FGF22Q9HCT0 170 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 SLC52A3Q9NQ40 469 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 ALKBH4Q9NXW9 302 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 MAP3K20Q9NYL2 800 aaKnown RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 RRP7AQ9Y3A4 280 aaKnown RBP2.09□□□□□ -2.07
LRCH3-209ENST00000452660 DAAM1Q9Y4D1 1078 aa2.09□□□□□ -2.07
LRCH3-209ENST00000452660 PCNX3Q9H6A9 2034 aa2.08□□□□□ -2.08
LRCH3-209ENST00000452660 BAZ1AQ9NRL2 1556 aaPredicted RBP2.08□□□□□ -2.08
LRCH3-209ENST00000452660 A0A087X002 238 aa2.08□□□□□ -2.08
LRCH3-209ENST00000452660 A0A1W2PPI3 338 aa2.08□□□□□ -2.08
LRCH3-209ENST00000452660 BUD23O43709 281 aaKnown RBP2.08□□□□□ -2.08
LRCH3-209ENST00000452660 CTSVO60911 334 aa2.08□□□□□ -2.08
LRCH3-209ENST00000452660 SRSF10O75494 262 aaKnown RBP2.08□□□□□ -2.08
LRCH3-209ENST00000452660 PLA2G4BP0C869 781 aa2.08□□□□□ -2.08
LRCH3-209ENST00000452660 FAM157CP0CG43 387 aa2.08□□□□□ -2.08
LRCH3-209ENST00000452660 CSF2RAP15509 400 aa2.08□□□□□ -2.08
LRCH3-209ENST00000452660 VEGFAP15692 232 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms