RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 MASP1P48740 699 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 LRRC55Q6ZSA7 311 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 BEND5Q7L4P6 421 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 VN1R5Q7Z5H4 357 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ZBTB2Q8N680 514 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ANKRD7Q92527 254 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF75CPQ92670 426 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 CLCC1Q96S66 551 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 GSDMCQ9BYG8 508 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 TMEM27Q9HBJ8 222 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SUSD2Q9UGT4 822 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 FAM237BA0A1B0GVD1 139 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 KIF1CO43896 1103 aaKnown RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 TNFAIP8O95379 198 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 TNFSF9P41273 254 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 ABRQ12979 859 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 GRB14Q14449 540 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 VITQ6UXI7 678 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RABEPKQ7Z6M1 372 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SLC41A1Q8IVJ1 513 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 RNF145Q96MT1 663 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 QKIQ96PU8 341 aaKnown RBP eCLIP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 SHCBP1LQ9BZQ2 653 aa8.53□□□□□ -1.04
PTPN3-204ENST00000446349 C19orf25Q9UFG5 118 aaPredicted RBP8.53□□□□□ -1.04
PTPN3-204ENST00000446349 CICQ96RK0 1608 aaPredicted RBP8.52□□□□□ -1.04
PTPN3-204ENST00000446349 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 SNAP91O60641 907 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 ESR1P03372 595 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 SRPRAP08240 638 aaKnown RBP8.52□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF33AQ06730 810 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 RALGDSQ12967 914 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 TMEM44Q2T9K0 475 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 EIPR1Q53HC9 387 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 RTL10Q7L3V2 364 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 SNX32Q86XE0 403 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 GKN2Q86XP6 184 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF276Q8N554 614 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 ZNF563Q8TA94 476 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 CREBZFQ9NS37 354 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 SCN11AQ9UI33 1791 aa8.52□□□□□ -1.04
PTPN3-204ENST00000446349 GABRB2P47870 512 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 TAF1AQ15573 450 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF618Q5T7W0 954 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 MOB2Q70IA6 237 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 GALNT7Q86SF2 657 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PCDH20Q8N6Y1 951 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ADAMTS15Q8TE58 950 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 MTMR8Q96EF0 704 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 FNDC11Q9BVV2 318 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ADAM33Q9BZ11 813 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 CCDC167Q9P0B6 97 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PRPF19Q9UMS4 504 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 RPL26L1Q9UNX3 145 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 SIGLEC1Q9BZZ2 1709 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 AZIN1O14977 448 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 HNRNPA1P09651 372 aaKnown RBP eCLIP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF30P17039 623 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PSMD7P51665 324 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PTSQ03393 145 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PWP1Q13610 501 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 CPTPQ5TA50 214 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 MED27Q6P2C8 311 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 DDHD1Q8NEL9 900 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 LACRTQ9GZZ8 138 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ARFGEF2Q9Y6D5 1785 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 RFXANKO14593 260 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 HDAC3O15379 428 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 AKAP8O43823 692 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 CLDN9O95484 217 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 AP2A1O95782 977 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 CLCNKBP51801 687 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 C10orf62Q5T681 223 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PLEKHA7Q6IQ23 1121 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 MTDHQ86UE4 582 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 TMEM192Q8IY95 271 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 DHRSXQ8N5I4 330 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 IL31RAQ8NI17 732 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 LCN9Q8WX39 176 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 NTAN1Q96AB6 310 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ZSCAN5AQ9BUG6 496 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 TLR10Q9BXR5 811 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ACE2Q9BYF1 805 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 SGK2Q9HBY8 427 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 SATB2Q9UPW6 733 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 TPST1O60507 370 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PIGRP01833 764 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 RPL4P36578 427 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 NRG3P56975 720 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PLIN5Q00G26 463 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 LRRC36Q1X8D7 754 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 PUS10Q3MIT2 529 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ZCWPW2Q504Y3 356 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF776Q68DI1 518 aaPredicted RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 FAM151BQ6UXP7 276 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 ZNF783Q6ZMS7 281 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 CCNB1IP1Q9NPC3 277 aa8.52□□□□□ -1.05
PTPN3-204ENST00000446349 DMGDHQ9UI17 866 aaKnown RBP8.52□□□□□ -1.05
PTPN3-204ENST00000446349 CLDN5O00501 218 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms