RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 KELP23276 732 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 VPS41P49754 854 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 TERF1P54274 439 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 HNRNPKP61978 463 aaKnown RBP eCLIP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 ETF1P62495 437 aaKnown RBP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 BASP1P80723 227 aaKnown RBP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 PPARDQ03181 441 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 DPTQ07507 201 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 INAVAQ3KP66 663 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 TPRG1LQ5T0D9 272 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 CCDC137Q6PK04 289 aaKnown RBP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 MACC1Q6ZN28 852 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 ZNF765Q7L2R6 523 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 LINC00523Q86TU6 105 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 HEATR4Q86WZ0 1026 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 HID1Q8IV36 788 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 RAVER1Q8IY67 606 aaKnown RBP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 DNAAF3Q8N9W5 541 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 RHBDD1Q8TEB9 315 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 TSACCQ96A04 125 aaPredicted RBP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 FUBP1Q96AE4 644 aaKnown RBP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 WDR92Q96MX6 357 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 SPATA16Q9BXB7 569 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 SLC13A1Q9BZW2 595 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 GPR27Q9NS67 375 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 KLQ9UEF7 1012 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 FEZ2Q9UHY8 353 aaPredicted RBP15.7■□□□□ 0.1
BRAT1-202ENST00000421712 PCDHGB2Q9Y5G2 931 aa15.7■□□□□ 0.1
BRAT1-202ENST00000421712 C2orf81A6NN90 581 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 INPP4BO15327 924 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 STX7O15400 261 aaKnown RBP15.69■□□□□ 0.1
BRAT1-202ENST00000421712 BUD23O43709 281 aaKnown RBP15.69■□□□□ 0.1
BRAT1-202ENST00000421712 PCDHGA12O60330 932 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 KRT14P02533 472 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 CSF2P04141 144 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 APRTP07741 180 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 CTSEP14091 401 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 TPH1P17752 444 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 TRIM23P36406 574 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 BLKP51451 505 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 CDK3Q00526 305 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 EIF2B5Q13144 721 aaKnown RBP15.69■□□□□ 0.1
BRAT1-202ENST00000421712 SHBQ15464 509 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 KCTD19Q17RG1 926 aaPredicted RBP15.69■□□□□ 0.1
BRAT1-202ENST00000421712 HS1BP3Q53T59 392 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 KCTD11Q693B1 232 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 TTC27Q6P3X3 843 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 DOK6Q6PKX4 331 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 NLRP8Q86W28 1048 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 NAXDQ8IW45 347 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 DEFB124Q8NES8 71 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 GRK7Q8WTQ7 553 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 BTN2A2Q8WVV5 523 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 EID2BQ96D98 161 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 CAMK1GQ96NX5 476 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 AGAP2Q99490 1192 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 LGR4Q9BXB1 951 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 SUDS3Q9H7L9 328 aaPredicted RBP15.69■□□□□ 0.1
BRAT1-202ENST00000421712 PIH1D1Q9NWS0 290 aaKnown RBP15.69■□□□□ 0.1
BRAT1-202ENST00000421712 DLL3Q9NYJ7 618 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 ARL5AQ9Y689 179 aa15.69■□□□□ 0.1
BRAT1-202ENST00000421712 ERI2A8K979 691 aaKnown RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 SCAMP1O15126 338 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 FLRT2O43155 660 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 ASMTLO95671 621 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 CRTAMO95727 393 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 TNFP01375 233 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 HOXC4P09017 264 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 MYCLP1P12525 358 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 BPIP17213 487 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 LPOP22079 712 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 DGKAP23743 735 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 EPHA8P29322 1005 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 HMGCLP35914 325 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 GRK6P43250 576 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 KIAA1024LP59773 190 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 SRP54P61011 504 aaKnown RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 GPS1Q13098 491 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 SEPT6Q14141 434 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 TAF1AQ15573 450 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 CYP1B1Q16678 543 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 CREG2Q8IUH2 290 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 PHACTR4Q8IZ21 702 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 TTC30BQ8N4P2 665 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 GPR26Q8NDV2 337 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 OR56A4Q8NGH8 313 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 OR52K1Q8NGK4 314 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 BRSK1Q8TDC3 778 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 LMX1AQ8TE12 382 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 SAP25Q8TEE9 199 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 HIC2Q96JB3 615 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 C16orf45Q96MC5 204 aaPredicted RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 TEX101Q9BY14 249 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 CDH19Q9H159 772 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 CAAP1Q9H8G2 361 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 APOBEC3BQ9UH17 382 aaKnown RBP15.68■□□□□ 0.1
BRAT1-202ENST00000421712 KLF15Q9UIH9 416 aa15.68■□□□□ 0.1
BRAT1-202ENST00000421712 NEMP2A6NFY4 417 aa15.67■□□□□ 0.1
BRAT1-202ENST00000421712 TMEM202A6NGA9 273 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms