RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 M0R3H8 397 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 HAS3O00219 553 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 FCHO1O14526 889 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 B4GALT5O43286 388 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 FRS3O43559 492 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TSPAN1O60635 241 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 SNX2O60749 519 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TACC1O75410 805 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PGK1P00558 417 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 HLA-DRAP01903 254 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 EDN1P05305 212 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 UQCRHP07919 91 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 KRT19P08727 400 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PNMA6AP0CW24 399 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 CXCL8P10145 99 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 MCF2P10911 925 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 APEHP13798 732 aaKnown RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TNFAIP3P21580 790 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TBXAS1P24557 533 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 ANXA13P27216 316 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCND3P30281 292 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 MAP2K2P36507 400 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TNFSF9P41273 254 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PRKCIP41743 596 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 NR4A2P43354 598 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PRMT2P55345 433 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 YWHAEP62258 255 aaKnown RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 NOP14P78316 857 aaKnown RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TFAMQ00059 246 aaKnown RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TIAL1Q01085 375 aaKnown RBP eCLIP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 GFPT1Q06210 699 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 POU5F1BQ06416 359 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 KCNAB1Q14722 419 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 DRAP1Q14919 205 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 LARS2Q15031 903 aaKnown RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 NFE2Q16621 373 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF750Q32MQ0 723 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZACNQ401N2 412 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 C4orf46Q504U0 113 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF569Q5MCW4 686 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 NOTUMQ6P988 496 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 WDR59Q6PJI9 974 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 VSTM1Q6UX27 236 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 CXCL17Q6UXB2 119 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 CLEC9AQ6UXN8 241 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 ENOSF1Q7L5Y1 443 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 BHLHA9Q7RTU4 235 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 CDR2LQ86X02 465 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TCEAL8Q8IYN2 117 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 HACE1Q8IYU2 909 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 SLC35F6Q8N357 371 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 LINC01465Q8N7H1 131 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 MNS1Q8NEH6 495 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRPV1Q8NER1 839 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TAS1R2Q8TE23 839 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 DNAJB3Q8WWF6 145 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 WDYHV1Q96HA8 205 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 CPB2Q96IY4 423 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 HIST1H2AAQ96QV6 131 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 NAPGQ99747 312 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 STK33Q9BYT3 514 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 MTMR12Q9C0I1 747 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 UPF3AQ9H1J1 476 aaKnown RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PDCL3Q9H2J4 239 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 FZD8Q9H461 694 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PDZD7Q9H5P4 517 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 USP29Q9HBJ7 922 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PDE11AQ9HCR9 933 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 RNF186Q9NXI6 227 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 AIPL1Q9NZN9 384 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 MYO1AQ9UBC5 1043 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 HDAC6Q9UBN7 1215 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 NKX1-2Q9UD57 310 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 GUCA1BQ9UMX6 200 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 PIN4Q9Y237 131 aaKnown RBP3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TNFSF13BQ9Y275 285 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRPV2Q9Y5S1 764 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 STYXL1Q9Y6J8 313 aa3.98□□□□□ -1.77
HMGB3P20-201ENST00000417997 ATP8B3O60423 1300 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 MROH7Q68CQ1 1323 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIP11Q15643 1979 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 MBLAC1A4D2B0 266 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CTAGE9A4FU28 777 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 AQP7P3A6NL99 342 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 VSTM5A8MXK1 200 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 AGPSO00116 658 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 SOCS2O14508 198 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 PMM2O15305 246 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CABYRO75952 493 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 LCA5LO95447 670 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 FGBP02675 491 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 ASGR1P07306 291 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CLTAP09496 248 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 H2AFZP0C0S5 128 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 STAG3L1P0CL83 205 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 P4HA1P13674 534 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 DARSP14868 501 aaKnown RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CD19P15391 556 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 ARF4P18085 180 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 AXLP30530 894 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 257.7 ms