RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 EFCAB7A8K855 629 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 NKX2-8O15522 239 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 PEX11BO96011 259 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 SOD1P00441 154 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 CPP00450 1065 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 TPM2P07951 284 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 ACTR1BP42025 376 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 ACTR1AP61163 376 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 PYCR3Q53H96 274 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 RALGPS1Q5JS13 557 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 RAET1GQ6H3X3 334 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 WDR74Q6RFH5 385 aaPredicted RBP15.33■□□□□ 0.04
DDX56-202ENST00000415758 CYP4V2Q6ZWL3 525 aaPredicted RBP15.33■□□□□ 0.04
DDX56-202ENST00000415758 NLRP8Q86W28 1048 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 FAM129CQ86XR2 697 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 SFRP1Q8N474 314 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 C9orf43Q8TAL5 461 aaPredicted RBP15.33■□□□□ 0.04
DDX56-202ENST00000415758 PEBP4Q96S96 227 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 KCTD15Q96SI1 283 aaPredicted RBP15.33■□□□□ 0.04
DDX56-202ENST00000415758 GPN2Q9H9Y4 310 aaPredicted RBP15.33■□□□□ 0.04
DDX56-202ENST00000415758 FBXO8Q9NRD0 319 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 SEPT11Q9NVA2 429 aaKnown RBP15.33■□□□□ 0.04
DDX56-202ENST00000415758 PARVAQ9NVD7 372 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 PLEKHM1Q9Y4G2 1056 aa15.33■□□□□ 0.04
DDX56-202ENST00000415758 NBPF19A0A087WUL8 3843 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 TTC24A2A3L6 582 aaPredicted RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 NPIPB15A6NHN6 443 aaPredicted RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 PSMA2P25787 234 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 ABHD18Q0P651 414 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 LRP8Q14114 963 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 DPYSQ14117 519 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 DENND2CQ68D51 928 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 PLEKHA7Q6IQ23 1121 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 PPP1R2P3Q6NXS1 205 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 ADAMTSL4Q6UY14 1074 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 TIPARPQ7Z3E1 657 aaKnown RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 TP53INP2Q8IXH6 220 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 PGBD5Q8N414 524 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 NEK11Q8NG66 645 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 OR10G6Q8NH81 332 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 PDCD6IPQ8WUM4 868 aaKnown RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 APOBEC4Q8WW27 367 aaKnown RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 KIAA1143Q96AT1 154 aaPredicted RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 OR2M4Q96R27 311 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 MGME1Q9BQP7 344 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 TRIT1Q9H3H1 467 aaKnown RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 NOD2Q9HC29 1040 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 CWC15Q9P013 229 aaKnown RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 PCSK1NQ9UHG2 260 aa15.32■□□□□ 0.04
DDX56-202ENST00000415758 TMEM184BQ9Y519 407 aaPredicted RBP15.32■□□□□ 0.04
DDX56-202ENST00000415758 SPENQ96T58 3664 aaKnown RBP15.31■□□□□ 0.04
DDX56-202ENST00000415758 LOC101059948A0A1B0GTJ6 334 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 TMEM191CA6NGB0 347 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 DUX1O43812 170 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 RNF8O76064 485 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 PGLSO95336 258 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 MAN1A1P33908 653 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 GPR1P46091 355 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 CDC20Q12834 499 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 TRAF2Q12933 501 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 ZNF235Q14590 738 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 NCAPHQ15003 741 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 PPP6R3Q5H9R7 873 aaPredicted RBP15.31■□□□□ 0.04
DDX56-202ENST00000415758 CEACAM20Q6UY09 585 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 TSPAN33Q86UF1 283 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 NRSN1Q8IZ57 195 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 SLC37A2Q8TED4 501 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 FNIP1Q8TF40 1166 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 ABHD17AQ96GS6 310 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 AHCYL2Q96HN2 611 aaKnown RBP15.31■□□□□ 0.04
DDX56-202ENST00000415758 PSMG3-AS1Q96PY0 264 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 SLC38A3Q99624 504 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 ABCG8Q9H221 673 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 ZNF71Q9NQZ8 489 aaPredicted RBP15.31■□□□□ 0.04
DDX56-202ENST00000415758 MAN2B2Q9Y2E5 1009 aa15.31■□□□□ 0.04
DDX56-202ENST00000415758 GOLGA6CA6NDK9 693 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 GOLGA6BA6NDN3 693 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 LRRC10BA6NIK2 292 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 MAFKO60675 156 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 PYGLP06737 847 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 CCDC172P0C7W6 258 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 GOLGA6DP0CG33 693 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 OAS2P29728 719 aaKnown RBP15.3■□□□□ 0.04
DDX56-202ENST00000415758 MIPP30301 263 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 MC1RQ01726 317 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 ARMC12Q5T9G4 340 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 USP45Q70EL2 814 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 ZNF765Q7L2R6 523 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 RAVER1Q8IY67 606 aaKnown RBP15.3■□□□□ 0.04
DDX56-202ENST00000415758 BBS5Q8N3I7 341 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 FAM26EQ8N5C1 309 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 PIH1D2Q8WWB5 315 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 USP9XQ93008 2570 aaPredicted RBP15.3■□□□□ 0.04
DDX56-202ENST00000415758 AP2M1Q96CW1 435 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 COX14Q96I36 57 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 ERGIC2Q96RQ1 377 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 SYT11Q9BT88 431 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 NUP62CLQ9H1M0 184 aa15.3■□□□□ 0.04
DDX56-202ENST00000415758 SARS2Q9NP81 518 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms