RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GPR180Q86V85 440 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 OFCC1Q8IZS5 231 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 THEM5Q8N1Q8 247 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 TANKQ92844 425 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 ALG9Q9H6U8 611 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 CD320Q9NPF0 282 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 INIPQ9NRY2 104 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 AGPAT4Q9NRZ5 378 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 DOLKQ9UPQ8 538 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 DNAJC15Q9Y5T4 150 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 HS3ST4Q9Y661 456 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 ZFC3H1O60293 1989 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 KANSL1LA0AUZ9 987 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 DHRS12A0PJE2 317 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 MEIS3P2A8K0S8 358 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 M0QZQ0 153 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 NME4O00746 187 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 GPIP06744 558 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 CD1DP15813 335 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 FASP25445 335 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 PSMA4P25789 261 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 SH3BP2P78314 561 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 MRPS6P82932 125 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 FAM110CQ1W6H9 321 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 KIF19Q2TAC6 998 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 TBCELQ5QJ74 424 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 KANK2Q63ZY3 851 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 SPATA19Q7Z5L4 167 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 SLC15A3Q8IY34 581 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 CASP10Q92851 521 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 CENPNQ96H22 339 aaPredicted RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 SERPINB11Q96P15 392 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 YTHDF1Q9BYJ9 559 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 OSBPL6Q9BZF3 934 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 TFB2MQ9H5Q4 396 aaKnown RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 SDR39U1Q9NRG7 319 aaPredicted RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 FAIMQ9NVQ4 179 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 TMEM45AQ9NWC5 275 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 RIMKLBQ9ULI2 386 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 FAF1Q9UNN5 650 aaPredicted RBP9.78□□□□□ -0.84
CD44-206ENST00000415148 ST3GAL5Q9UNP4 418 aa9.78□□□□□ -0.84
CD44-206ENST00000415148 ANKRD12Q6UB98 2062 aa9.77□□□□□ -0.84
CD44-206ENST00000415148 LOC285095A0A1B0GVY8 99 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 A0A1W2PPW3 197 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TTC24A2A3L6 582 aaPredicted RBP9.77□□□□□ -0.85
CD44-206ENST00000415148 TNFRSF10BO14763 440 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 AZIN1O14977 448 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 ANGPT2O15123 496 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 CDK14O94921 469 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 MT-ND1P03886 318 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 MMP2P08253 660 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 ZNF865P0CJ78 1059 aaPredicted RBP9.77□□□□□ -0.85
CD44-206ENST00000415148 UMPSP11172 480 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 RHOQP17081 205 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 LBPP18428 481 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 MERTKQ12866 999 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 CAPRIN1Q14444 709 aaKnown RBP9.77□□□□□ -0.85
CD44-206ENST00000415148 ATP6AP1Q15904 470 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 SLC36A3Q495N2 470 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 FGD3Q5JSP0 725 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TMTC4Q5T4D3 741 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 OGFOD2Q6N063 350 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 AGMOQ6ZNB7 445 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TMEM26Q6ZUK4 368 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 GPR141Q7Z602 305 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 SPRED1Q7Z699 444 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 SPPL2CQ8IUH8 684 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 PHYKPLQ8IUZ5 450 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TERB1Q8NA31 727 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 SMYD1Q8NB12 490 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TRPV3Q8NET8 790 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 OR6P1Q8NGX9 317 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 SCAMP5Q8TAC9 235 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 HDAC10Q969S8 669 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 ERLEC1Q96DZ1 483 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 MYRFLQ96LU7 910 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 NPLQ9BXD5 320 aaPredicted RBP9.77□□□□□ -0.85
CD44-206ENST00000415148 TRIM54Q9BYV2 358 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 AP5M1Q9H0R1 490 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 NOL6Q9H6R4 1146 aaKnown RBP9.77□□□□□ -0.85
CD44-206ENST00000415148 NT5MQ9NPB1 228 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 RGS18Q9NS28 235 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TMLHEQ9NVH6 421 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 AURKCQ9UQB9 309 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TLR6Q9Y2C9 796 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 TRPV2Q9Y5S1 764 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 CCL15-CCL14A0A0B4J2E2 113 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 SH3PXD2BA1X283 911 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 LRRC14BA6NHZ5 514 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 CCL22O00626 93 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 GLP2RO95838 553 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 IDO1P14902 403 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 POLR2IP36954 125 aaKnown RBP9.77□□□□□ -0.85
CD44-206ENST00000415148 CD86P42081 329 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 SCNN1GP51170 649 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 AFF1P51825 1210 aaKnown RBP9.77□□□□□ -0.85
CD44-206ENST00000415148 CCL15Q16663 113 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 PRAMEF19Q5SWL8 479 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 GPR107Q5VW38 600 aa9.77□□□□□ -0.85
CD44-206ENST00000415148 MRNIPQ6NTE8 343 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms