RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CDKN2DP55273 166 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 POM121L1PQ3SYA9 428 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 C9orf64Q5T6V5 341 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 FAM45BPQ6NSW5 357 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 FAM151BQ6UXP7 276 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF771Q7L3S4 317 aaPredicted RBP14.02□□□□□ -0.16
GPNMB-203ENST00000409458 PIM3Q86V86 326 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 CENPLQ8N0S6 344 aaPredicted RBP14.02□□□□□ -0.16
GPNMB-203ENST00000409458 STK40Q8N2I9 435 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 CCDC63Q8NA47 563 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 FAM45AQ8TCE6 357 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 KCTD4Q8WVF5 259 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 ZNF75CPQ92670 426 aaPredicted RBP14.02□□□□□ -0.16
GPNMB-203ENST00000409458 LRIG1Q96JA1 1093 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 TMEM245Q9H330 911 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 ZDHHC4Q9NPG8 344 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 TLK1Q9UKI8 766 aa14.02□□□□□ -0.16
GPNMB-203ENST00000409458 UNC80Q8N2C7 3258 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 UPK3BL1B0FP48 263 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 UPK3BL2E5RIL1 263 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 DNAJC6O75061 913 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 PRAMEF1O95521 474 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 BPGMP07738 259 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 C1SP09871 688 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CHRM1P11229 460 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 BGNP21810 368 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CA5AP35218 305 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 IL12RB1P42701 662 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SLC12A2P55011 1212 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 PTSQ03393 145 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CACNG1Q06432 222 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 DLG1Q12959 904 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 ZNF805Q5CZA5 627 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 EGFLAMQ63HQ2 1017 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SERPINA13PQ6UXR4 307 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 FAM47EQ6ZV65 393 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CPLX4Q7Z7G2 160 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 UCMAQ8WVF2 138 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SCG3Q8WXD2 468 aaKnown RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 C19orf43Q9BQ61 176 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 AARSD1Q9BTE6 412 aaKnown RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SLCO1B3Q9NPD5 702 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CORO1CQ9ULV4 474 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 VWA7Q9Y334 891 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 BRWD1Q9NSI6 2320 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 A0A087X1B8 175 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 UBA6A0AVT1 1052 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 NDUFS3O75489 264 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SRP72O76094 671 aaKnown RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 WISP3O95389 354 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 TIMP2P16035 220 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 FDXRP22570 491 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SPAM1P38567 509 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 GRIA2P42262 883 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 METAP1P53582 386 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 POLR2LP62875 67 aaKnown RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 TIAL1Q01085 375 aaKnown RBP eCLIP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 PCLAFQ15004 111 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 AAK1Q2M2I8 961 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CCDC153Q494R4 210 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 RNF187Q5TA31 235 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 CGB2Q6NT52 195 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 FOXR1Q6PIV2 292 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 RFLNAQ6ZTI6 216 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 PARS2Q7L3T8 475 aaKnown RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 TAS2R42Q7RTR8 314 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SPATA6LQ8N4H0 392 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 PBXIP1Q96AQ6 731 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 TSPAN17Q96FV3 270 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 TCF12Q99081 682 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 ACOX2Q99424 681 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 GAS2L1Q99501 681 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 NSRP1Q9H0G5 558 aaKnown RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 MANSC1Q9H8J5 431 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 FBRSL1Q9HCM7 1045 aaKnown RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 PCDH12Q9NPG4 1184 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 IL26Q9NPH9 171 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SIRPGQ9P1W8 387 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 THAP10Q9P2Z0 257 aaPredicted RBP14.01□□□□□ -0.17
GPNMB-203ENST00000409458 DKK3Q9UBP4 350 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SARDHQ9UL12 918 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 ACOT9Q9Y305 439 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 SLC30A1Q9Y6M5 507 aa14.01□□□□□ -0.17
GPNMB-203ENST00000409458 GLYATL1P3A0A0U1RQE8 302 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 C16orf96A6NNT2 1141 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 C2CD4DB7Z1M9 353 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 OR1I1O60431 355 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 APODP05090 189 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 CYP2A6P11509 494 aaPredicted RBP14□□□□□ -0.17
GPNMB-203ENST00000409458 ALDH3A1P30838 453 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 FMO4P31512 558 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 VIPR1P32241 457 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 TTPAP49638 278 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 SF3A3Q12874 501 aaKnown RBP eCLIP14□□□□□ -0.17
GPNMB-203ENST00000409458 ILF2Q12905 390 aaKnown RBP14□□□□□ -0.17
GPNMB-203ENST00000409458 AARS2Q5JTZ9 985 aaKnown RBP14□□□□□ -0.17
GPNMB-203ENST00000409458 CES4AQ5XG92 561 aa14□□□□□ -0.17
GPNMB-203ENST00000409458 CBARPQ8N350 705 aaPredicted RBP14□□□□□ -0.17
GPNMB-203ENST00000409458 GPR26Q8NDV2 337 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms