RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PTGER3P43115 390 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 ARSDP51689 593 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 LRRC14Q15048 493 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 WSCD2Q2TBF2 565 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 PLK5Q496M5 336 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 PMS2CLQ68D20 193 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 MICALCLQ6ZW33 695 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 KLF6Q99612 283 aaPredicted RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 RIOK2Q9BVS4 552 aaKnown RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 PHACTR1Q9C0D0 580 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 SUDS3Q9H7L9 328 aaPredicted RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 IL26Q9NPH9 171 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 TREX1Q9NSU2 369 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 RIMKLBQ9ULI2 386 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 FANCMQ8IYD8 2048 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 HADHAP40939 763 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 ANKRD20A4Q4UJ75 823 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 ARMC3Q5W041 872 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 CCNI2Q6ZMN8 369 aaPredicted RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 TMEM135Q86UB9 458 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 PELI3Q8N2H9 469 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 EIF1ADQ8N9N8 165 aaKnown RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 TP53I13Q8NBR0 393 aaPredicted RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 ZNF669Q96BR6 464 aaPredicted RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 CENPTQ96BT3 561 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 CDKN2AIPNLQ96HQ2 116 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 TBATAQ96M53 351 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 FCRL3Q96P31 734 aaPredicted RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 C1QTNF7Q9BXJ2 289 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 PARD6BQ9BYG5 372 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 MBNL1Q9NR56 388 aaKnown RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 ZC3H7BQ9UGR2 993 aaKnown RBP33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 R4GN57 208 aa33.17■■■□□ 2.9
CSNK1E-204ENST00000403904 ZNF106Q9H2Y7 1883 aaKnown RBP33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 A0A1W2PPC4 97 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 PGAM1P18669 254 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 MAOBP27338 520 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 SPAM1P38567 509 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 FAM151BQ6UXP7 276 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 PRSS33Q8NF86 280 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 PYROXD1Q8WU10 500 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 PEX13Q92968 403 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 CFAP36Q96G28 342 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 PLEKHG4BQ96PX9 1271 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 ORAI3Q9BRQ5 295 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 NAT9Q9BTE0 207 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 RAD18Q9NS91 495 aa33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 EIF2B4Q9UI10 523 aaKnown RBP33.16■■■□□ 2.9
CSNK1E-204ENST00000403904 POLBP06746 335 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 FAM153BP0C7A2 387 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 HNRNPA2B1P22626 353 aaKnown RBP33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 PSMA3P25788 255 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 MAGEA4P43358 317 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 DCDC1P59894 354 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 ACVR1Q04771 509 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 SIM2Q14190 667 aaPredicted RBP33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 IRF4Q15306 451 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 ELF2Q15723 593 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 FAM153CQ494X1 144 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 WDR93Q6P2C0 686 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 ZNF765Q7L2R6 523 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 PLA2G15Q8NCC3 412 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 HDAC10Q969S8 669 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 LENG8Q96PV6 779 aaPredicted RBP33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 AGAP2Q99490 1192 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 C19orf43Q9BQ61 176 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 TSPYL1Q9H0U9 437 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 KCTD5Q9NXV2 234 aa33.15■■■□□ 2.9
CSNK1E-204ENST00000403904 K7ESM1 405 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 USP1O94782 785 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 PCCBP05166 539 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 DHPSP49366 369 aaPredicted RBP33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 TCF15Q12870 199 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 SPDYCQ5MJ68 293 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 HENMT1Q5T8I9 393 aaKnown RBP33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 ZDHHC20Q5W0Z9 365 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 C9orf72Q96LT7 481 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 PRRX2Q99811 253 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 CDH19Q9H159 772 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 NFKBIL1Q9UBC1 381 aaPredicted RBP33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 DMTF1Q9Y222 760 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 CA5BQ9Y2D0 317 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 SLCO1B1Q9Y6L6 691 aa33.14■■■□□ 2.9
CSNK1E-204ENST00000403904 GLYATL1P3A0A0U1RQE8 302 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 GAPDHSO14556 408 aaPredicted RBP33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 CD27P26842 260 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 XIAPP98170 497 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 DPTQ07507 201 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 PEX6Q13608 980 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 KDM7AQ6ZMT4 941 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 CCNJLQ8IV13 435 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 SERAC1Q96JX3 654 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 ZC3H10Q96K80 434 aaKnown RBP33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 SPATA16Q9BXB7 569 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 PLAC1Q9HBJ0 212 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 ZCWPW2A0A1B0GU75 182 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 AKT2P31751 481 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 NUDT1P36639 197 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 CLDN2P57739 230 aa33.13■■■□□ 2.89
CSNK1E-204ENST00000403904 CRYMQ14894 314 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms