RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SLC38A3Q99624 504 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 MAK16Q9BXY0 300 aaKnown RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 FRMD8Q9BZ67 464 aaPredicted RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 ASPSCR1Q9BZE9 553 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 RDH14Q9HBH5 336 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 SPATS2LQ9NUQ6 558 aaKnown RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 RBM22Q9NW64 420 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDR1-229ENST00000396342 ZNHIT2Q9UHR6 403 aa16.32■□□□□ 0.2
DDR1-229ENST00000396342 RPL26L1Q9UNX3 145 aaKnown RBP16.32■□□□□ 0.2
DDR1-229ENST00000396342 DOCK9Q9BZ29 2069 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 PRAMEF33A0A0G2JMD5 474 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 MATN3O15232 486 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 PRAMEF10O60809 474 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 C1QL1O75973 258 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 CYP1A2P05177 515 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 FGF1P05230 155 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 H2AFZP0C0S5 128 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 CCNCP24863 283 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 ADCY8P40145 1251 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 GARSP41250 739 aaKnown RBP16.31■□□□□ 0.2
DDR1-229ENST00000396342 GPLD1P80108 840 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 FANCCQ00597 558 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 LRRC66Q68CR7 880 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 CYP4V2Q6ZWL3 525 aaPredicted RBP16.31■□□□□ 0.2
DDR1-229ENST00000396342 H2AFVQ71UI9 128 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 MARK2Q7KZI7 788 aaKnown RBP16.31■□□□□ 0.2
DDR1-229ENST00000396342 RAVER1Q8IY67 606 aaKnown RBP16.31■□□□□ 0.2
DDR1-229ENST00000396342 CCL4L1Q8NHW4 92 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 ZNF564Q8TBZ8 553 aaPredicted RBP16.31■□□□□ 0.2
DDR1-229ENST00000396342 TAAR9Q96RI9 348 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 ZNF670Q9BS34 389 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 ETNK2Q9NVF9 386 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 PKD2L2Q9NZM6 624 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 UVRAGQ9P2Y5 699 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 SLC17A4Q9Y2C5 497 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 PTPRQQ9UMZ3 2332 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 MYLKQ15746 1914 aa16.31■□□□□ 0.2
DDR1-229ENST00000396342 NBEAQ8NFP9 2946 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 PMS2P1A4D2B8 440 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 DUX1O43812 170 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 ITIH1P19827 911 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 PTMSP20962 102 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 B4GALNT1Q00973 533 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 ANKRD20A8PQ5CZ79 823 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 PRICKLE2Q7Z3G6 844 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 NLRP8Q86W28 1048 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 TP53INP2Q8IXH6 220 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 PGBD5Q8N414 524 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 IL22RA1Q8N6P7 574 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 OR4D9Q8NGE8 314 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 TTC9Q92623 222 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 ABCG8Q9H221 673 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 SEMA6CQ9H3T2 930 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 RAD18Q9NS91 495 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 CD84Q9UIB8 345 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 CAPN11Q9UMQ6 739 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 PPIL1Q9Y3C6 166 aa16.3■□□□□ 0.2
DDR1-229ENST00000396342 LAMA5O15230 3695 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 A0A0J9YYE9 177 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 EFSO43281 561 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 SLC28A2O43868 658 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 TRBC1P01850 177 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 LHCGRP22888 699 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 AK4P27144 223 aaPredicted RBP16.29■□□□□ 0.2
DDR1-229ENST00000396342 POLD2P49005 469 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 RAB15P59190 212 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 GALNT2Q10471 571 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 E4F1Q66K89 784 aaPredicted RBP16.29■□□□□ 0.2
DDR1-229ENST00000396342 TSPAN33Q86UF1 283 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 FAM129CQ86XR2 697 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 SLITRK4Q8IW52 837 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 TEX26Q8N6G2 289 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 LPCAT1Q8NF37 534 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 PIH1D2Q8WWB5 315 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 KIAA1143Q96AT1 154 aaPredicted RBP16.29■□□□□ 0.2
DDR1-229ENST00000396342 BTBD6Q96KE9 485 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 CCDC74BQ96LY2 380 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.29■□□□□ 0.2
DDR1-229ENST00000396342 RMI1Q9H9A7 625 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 PCDH9Q9HC56 1237 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 CHKBQ9Y259 395 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 TMEM98Q9Y2Y6 226 aa16.29■□□□□ 0.2
DDR1-229ENST00000396342 C1orf232A0A0U1RR37 186 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 RGSL1A5PLK6 1076 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 INPP4BO15327 924 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 B4GAT1O43505 415 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 PEX11BO96011 259 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 SLC25A11Q02978 314 aaKnown RBP16.28■□□□□ 0.2
DDR1-229ENST00000396342 PAFAH1B3Q15102 231 aaKnown RBP16.28■□□□□ 0.2
DDR1-229ENST00000396342 TGIF1Q15583 401 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 DCAF12Q5T6F0 453 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 KCTD16Q68DU8 428 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 ZNF438Q7Z4V0 828 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 TECPR1Q7Z6L1 1165 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 SLC9B2Q86UD5 537 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 ZFAND4Q86XD8 727 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 PHYKPLQ8IUZ5 450 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 CCDC13Q8IYE1 715 aa16.28■□□□□ 0.2
DDR1-229ENST00000396342 FATE1Q969F0 183 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms