RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PPP2R2DQ66LE6 453 aa14.92□□□□□ -0.02
CCT4-201ENST00000394440 RYBPQ8N488 228 aaPredicted RBP14.92□□□□□ -0.02
CCT4-201ENST00000394440 SREK1Q8WXA9 508 aaKnown RBP14.92□□□□□ -0.02
CCT4-201ENST00000394440 ASB16Q96NS5 453 aa14.92□□□□□ -0.02
CCT4-201ENST00000394440 BIRC8Q96P09 236 aa14.92□□□□□ -0.02
CCT4-201ENST00000394440 CDCA3Q99618 268 aaPredicted RBP14.92□□□□□ -0.02
CCT4-201ENST00000394440 ZFYVE1Q9HBF4 777 aa14.92□□□□□ -0.02
CCT4-201ENST00000394440 DUS2Q9NX74 493 aaKnown RBP14.92□□□□□ -0.02
CCT4-201ENST00000394440 MYO9BQ13459 2157 aa14.92□□□□□ -0.02
CCT4-201ENST00000394440 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 DNAJC8O75937 253 aaPredicted RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 CISD3P0C7P0 127 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 ZNF37AP17032 561 aaPredicted RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 VIPR2P41587 438 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 TTPAP49638 278 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 NCALDP61601 193 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 PFKPQ01813 784 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 ACAP2Q15057 778 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 TCEAL5Q5H9L2 206 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 FAM78AQ5JUQ0 283 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 NAT16Q8N8M0 369 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 SUV39H2Q9H5I1 410 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 DZANK1Q9NVP4 752 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 HEY2Q9UBP5 337 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 ERVW-1Q9UQF0 538 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 VPS9D1Q9Y2B5 631 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 POP4O95707 220 aaKnown RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 KITP10721 976 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 CD9P21926 228 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 SERPINB3P29508 390 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 SKIV2L2P42285 1042 aaKnown RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 VASPP50552 380 aaPredicted RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 ADARP55265 1226 aaKnown RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 CTC1Q2NKJ3 1217 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 TRIM68Q6AZZ1 485 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 Q6ZVU0 165 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 CLNKQ7Z7G1 428 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 MTDHQ86UE4 582 aaKnown RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 WDR75Q8IWA0 830 aaKnown RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 TXNDC5Q8NBS9 432 aaKnown RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 OR2A12Q8NGT7 310 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 GRIN3AQ8TCU5 1115 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 PPP4R1Q8TF05 950 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 FRS2Q8WU20 508 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 MCCC1Q96RQ3 725 aaPredicted RBP14.91□□□□□ -0.02
CCT4-201ENST00000394440 DRC3Q9H069 523 aa14.91□□□□□ -0.02
CCT4-201ENST00000394440 C1orf232A0A0U1RR37 186 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 UBA6A0AVT1 1052 aaPredicted RBP14.9□□□□□ -0.02
CCT4-201ENST00000394440 ZNF195O14628 629 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 NDUFS3O75489 264 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 RBP1P09455 135 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 ADH5P11766 374 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 AQP5P55064 265 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 CACNG1Q06432 222 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 ZRANB3Q5FWF4 1079 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 AARS2Q5JTZ9 985 aaKnown RBP14.9□□□□□ -0.02
CCT4-201ENST00000394440 MAVSQ7Z434 540 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 BPIFB1Q8TDL5 484 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 MYLIPQ8WY64 445 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 FGF13Q92913 245 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 SCRN2Q96FV2 425 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 ZNF641Q96N77 438 aaPredicted RBP14.9□□□□□ -0.02
CCT4-201ENST00000394440 WWP1Q9H0M0 922 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 HAO1Q9UJM8 370 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 NPIPB15A6NHN6 443 aaPredicted RBP14.9□□□□□ -0.02
CCT4-201ENST00000394440 CLDN7O95471 211 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 CD1DP15813 335 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 POLR2EP19388 210 aaKnown RBP14.9□□□□□ -0.02
CCT4-201ENST00000394440 ATP5F1P24539 256 aaPredicted RBP14.9□□□□□ -0.02
CCT4-201ENST00000394440 DNAJB13P59910 316 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 RAB30Q15771 203 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 ACCSLQ4AC99 568 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 FAM91A1Q658Y4 838 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 KLC3Q6P597 504 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 ISCA2Q86U28 154 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 C12orf40Q86WS4 652 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 ETFBKMTQ8IXQ9 262 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 CHST14Q8NCH0 376 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 SMARCD2Q92925 531 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 FAM96AQ9H5X1 160 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 STN1Q9H668 368 aaKnown RBP14.9□□□□□ -0.02
CCT4-201ENST00000394440 ZDHHC6Q9H6R6 413 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 PNPOQ9NVS9 261 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 ZFP69BQ9UJL9 534 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 SLC27A6Q9Y2P4 619 aa14.9□□□□□ -0.02
CCT4-201ENST00000394440 PIKFYVEQ9Y2I7 2098 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 GPR39O43194 453 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 UNC5CO95185 931 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 FSHRP23945 695 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 FMO4P31512 558 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 MAGEA9P43362 315 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 RCN2Q14257 317 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 GAB4Q2WGN9 574 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 CTSL3PQ5NE16 218 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 RARS2Q5T160 578 aaKnown RBP14.89□□□□□ -0.03
CCT4-201ENST00000394440 TPRG1Q6ZUI0 275 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 GPR149Q86SP6 731 aa14.89□□□□□ -0.03
CCT4-201ENST00000394440 CBARPQ8N350 705 aaPredicted RBP14.89□□□□□ -0.03
CCT4-201ENST00000394440 ZNF781Q8N8C0 355 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms