RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 HIST2H2BCQ6DN03 193 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 OR7E24Q6IFN5 339 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 LRRC8EQ6NSJ5 796 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 DUS1LQ6P1R4 473 aaKnown RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 LCTLQ6UWM7 567 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 GFRALQ6UXV0 394 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 MTSS1LQ765P7 747 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC46A3Q7Z3Q1 461 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 MYPOPQ86VE0 399 aaPredicted RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SATL1Q86VE3 508 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM219Q86XT9 240 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CHERPQ8IWX8 916 aaKnown RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SPATA6LQ8N4H0 392 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ZBTB2Q8N680 514 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 KBTBD3Q8NAB2 608 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 HUS1BQ8NHY5 278 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 THAP6Q8TBB0 222 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ZCCHC10Q8TBK6 192 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SLC20A1Q8WUM9 679 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 RND1Q92730 232 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ABTB1Q969K4 478 aaPredicted RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PIGTQ969N2 578 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF501Q96CX3 271 aaPredicted RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ORAI1Q96D31 301 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 LGALS12Q96DT0 336 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 KIF1BPQ96EK5 621 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ABHD8Q96I13 439 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ST6GAL2Q96JF0 529 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 C17orf77Q96MU5 243 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CMKLR1Q99788 373 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ASCL2Q99929 193 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM47Q9BQJ4 181 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 REEP2Q9BRK0 252 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 HAUS8Q9BT25 410 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 FSD1Q9BTV5 496 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 LMAN2LQ9H0V9 348 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SIL1Q9H173 461 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PLEKHA4Q9H4M7 779 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 TFB2MQ9H5Q4 396 aaKnown RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 BICC1Q9H694 974 aaKnown RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ZNF696Q9H7X3 374 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 LRRC4Q9HBW1 653 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 ECHDC1Q9NTX5 307 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 TMEM30AQ9NV96 361 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 CTNNAL1Q9UBT7 734 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 TAGLN3Q9UI15 199 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 FBXL2Q9UKC9 423 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 C2CD2Q9Y426 696 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 JRKLQ9Y4A0 524 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 COMMD10Q9Y6G5 202 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 SMAD5-AS1Q9Y6J3 95 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PRSS21Q9Y6M0 314 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PDS5AQ29RF7 1337 aaKnown RBP1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 WDR81Q562E7 1941 aa1.28□□□□□ -2.2
SNORD28B-201ENST00000390993 PTPRCP08575 1304 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 A0A1B0GU03 582 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 CCDC194A0A1B0GVG4 234 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 FAM90A7PA6NKC0 464 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 FAM90A22PA8MWA6 464 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 FAM90A12PA8MX19 464 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 FAM90A23PA8MXZ1 464 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 ANKRD66B4E2M5 251 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 EIF3CLB5ME19 914 aaKnown RBP1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 NCAM2O15394 837 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 KLK8O60259 260 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 TACC1O75410 805 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 PDE9AO76083 593 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 EGFP01133 1207 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 IGHV4-39P01824 125 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 HEXAP06865 529 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 FAM106CPP0CH98 169 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 GNAZP19086 355 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 ITGAXP20702 1163 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 CORO1AP31146 461 aaKnown RBP1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 HOXC9P31274 260 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 AHRP35869 848 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 NOVP48745 357 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 CTCFP49711 727 aaPredicted RBP1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 KRTAP10-5P60370 271 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 ISL1P61371 349 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 RPP30P78346 268 aaKnown RBP1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 NEXNQ0ZGT2 675 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 ITGA9Q13797 1035 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 GPR68Q15743 365 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 GSTA3Q16772 222 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 EIF2S3LQ2VIR3 472 aaKnown RBP1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 USP41Q3LFD5 358 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 ZNF766Q5HY98 468 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 TCTE1Q5JU00 501 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 C6orf141Q5SZD1 244 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 FRG2Q64ET8 278 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 FAM171BQ6P995 826 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 TRIM65Q6PJ69 517 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 ATF7IPQ6VMQ6 1270 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 ASB18Q6ZVZ8 466 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 TDRPQ86YL5 185 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 MAP7D3Q8IWC1 876 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 C1orf87Q8N0U7 546 aa1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 SRBD1Q8N5C6 995 aaKnown RBP1.27□□□□□ -2.21
SNORD28B-201ENST00000390993 LSM14AQ8ND56 463 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms