RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ACADSBP45954 432 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 YBX1P67809 324 aaKnown RBP14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 FRG1Q14331 258 aaKnown RBP14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 IMPG1Q17R60 797 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 OTUD3Q5T2D3 398 aaPredicted RBP14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 RSBN1Q5VWQ0 802 aaPredicted RBP14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 PRMT9Q6P2P2 845 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 ADCK1Q86TW2 530 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 ASCC1Q8N9N2 400 aaKnown RBP14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 UBA3Q8TBC4 463 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 TWNKQ96RR1 684 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 GPR22Q99680 433 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 OMDQ99983 421 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 ABCB10Q9NRK6 738 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 MFHAS1Q9Y4C4 1052 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 ICMTO60725 284 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 CNMDO75829 334 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 MT-ND1P03886 318 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 MTHFD1P11586 935 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 PCMT1P22061 227 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 HADHAP40939 763 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 GNG2P59768 71 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 GRM1Q13255 1194 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 C6orf141Q5SZD1 244 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 PRR23BQ6ZRT6 265 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 PIWIL4Q7Z3Z4 852 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 MINDY1Q8N5J2 469 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 RNF149Q8NC42 400 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 OR52K1Q8NGK4 314 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 OR13J1Q8NGT2 312 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 DYNC2LI1Q8TCX1 351 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 ELMO2Q96JJ3 720 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 GPR78Q96P69 363 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 NECTIN3Q9NQS3 549 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 PDE10AQ9Y233 779 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 CXCL11O14625 94 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 CCNKO75909 580 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 DLGAP3O95886 979 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 UBL4AP11441 157 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 GABARAPL2P60520 117 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 PTPN11Q06124 597 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 PSMD5Q16401 504 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 CST9Q5W186 159 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 TAF2Q6P1X5 1199 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 TXNDC5Q8NBS9 432 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 CHDHQ8NE62 594 aaPredicted RBP14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 DACH2Q96NX9 599 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 SNX18Q96RF0 628 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 SLC30A3Q99726 388 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 SPC25Q9HBM1 224 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 ANAPC2Q9UJX6 822 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 KCNH4Q9UQ05 1017 aa14.64□□□□□ -0.07
VPS9D1-201ENST00000389386 FXYD1O00168 92 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 DPYSL4O14531 572 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 KRT8P05787 483 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 GPX3P22352 226 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 ARSFP54793 590 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 P2RX3P56373 397 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 USP10Q14694 798 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 CCDC81Q6ZN84 652 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 FAM20CQ8IXL6 584 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 C8orf59Q8N0T1 100 aaPredicted RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 POC5Q8NA72 575 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 LSM14AQ8ND56 463 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 ATL1Q8WXF7 558 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 SEPT1Q8WYJ6 367 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 RBPJLQ9UBG7 517 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 HMGXB4Q9UGU5 601 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 PCDHGA8Q9Y5G5 932 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 BBIP1A8MTZ0 92 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 RAD51BO15315 384 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 SEC24AO95486 1093 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 SLC6A2P23975 617 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 YWHAQP27348 245 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 ALDH4A1P30038 563 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 AVPR1AP37288 418 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 RACK1P63244 317 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 CAPRIN1Q14444 709 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 TARBP2Q15633 366 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 PYCR3Q53H96 274 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 UTS2BQ765I0 119 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 RALGPS2Q86X27 583 aaPredicted RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 SLC38A6Q8IZM9 456 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 SMG8Q8ND04 991 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 ELOVL4Q9GZR5 314 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 C2orf40Q9H1Z8 148 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 DSN1Q9H410 356 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 IARS2Q9NSE4 1012 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 NRBP2Q9NSY0 501 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 UGT2A1Q9Y4X1 527 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 PCDHB3Q9Y5E6 796 aa14.63□□□□□ -0.07
VPS9D1-201ENST00000389386 IGKV6D-21A0A0A0MT36 114 aa14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 ZNF99A8MXY4 864 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 HACD1B0YJ81 288 aa14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 B4GALT5O43286 388 aa14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 MYL3P08590 195 aa14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 THRBP10828 461 aa14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 GRK3P35626 688 aa14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 SLC26A2P50443 739 aa14.62□□□□□ -0.07
VPS9D1-201ENST00000389386 ATP4BP51164 291 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms