RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 SLITRK6Q9H5Y7 841 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 CLK4Q9HAZ1 481 aaKnown RBP5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 UBA2Q9UBT2 640 aaPredicted RBP5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 CDC14AQ9UNH5 594 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 EXO1Q9UQ84 846 aaKnown RBP5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 RAI2Q9Y5P3 530 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 A0A1B0GVM2 712 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 OR2A25A4D2G3 310 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 SOCS2O14508 198 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 ATP2A1O14983 1001 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 AVILO75366 819 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 VNN2O95498 520 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 CYC1P08574 325 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 G6PDP11413 515 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 SELLP14151 372 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 MAOAP21397 527 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 LIG4P49917 911 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 NANOS3P60323 173 aaKnown RBP5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 GRSF1Q12849 480 aaKnown RBP eCLIP5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 LAMB3Q13751 1172 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 PCLAFQ15004 111 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 PPP6R3Q5H9R7 873 aaPredicted RBP5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 TYW3Q6IPR3 259 aaKnown RBP5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 Q6ZSV7 163 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 PIP4P1Q86T03 277 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 KBTBD6Q86V97 674 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 LINC00346Q8IVM7 164 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 MCEMP1Q8IX19 187 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 IL17RCQ8NAC3 791 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 KCTD6Q8NC69 237 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 LRFN5Q96NI6 719 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 TMEM79Q9BSE2 394 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 KLHL4Q9C0H6 718 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 RBM38Q9H0Z9 239 aaKnown RBP5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 SIL1Q9H173 461 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 RABEP2Q9H5N1 569 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 PLAC1Q9HBJ0 212 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 ACSS1Q9NUB1 689 aaPredicted RBP5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 OR14J1Q9UGF5 321 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 FZD10Q9ULW2 581 aa5.47□□□□□ -1.53
RNU6-40P-201ENST00000384254 hCG_1809904A0A1W2PP81 198 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 A0A1W2PPE2 198 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 A0A1W2PR64 198 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 A6NL46 340 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 WNT9BO14905 357 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 ADAM20O43506 726 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 FTCDO95954 541 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 ADRB2P07550 413 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 ABCB1P08183 1280 aaPredicted RBP5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 STX2P32856 288 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 CAPZA2P47755 286 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 GPR143P51810 404 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 NUDT6P53370 316 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 PNLIPRP2P54317 469 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 SSBP2P81877 361 aaPredicted RBP5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 GRIK2Q13002 908 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 FNBP1LQ5T0N5 605 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 KCTD18Q6PI47 426 aaPredicted RBP5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 TAOK1Q7L7X3 1001 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 SDCCAG8Q86SQ7 713 aaPredicted RBP5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 SCYL3Q8IZE3 742 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 AADATQ8N5Z0 425 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 TXNDC15Q96J42 360 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 GCNAQ96QF7 691 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 PAFAH2Q99487 392 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 PIGMQ9H3S5 423 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 ESRP2Q9H6T0 727 aaKnown RBP5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 EPB41L5Q9HCM4 733 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 CNGB3Q9NQW8 809 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 STK39Q9UEW8 545 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 CLIC4Q9Y696 253 aa5.46□□□□□ -1.54
RNU6-40P-201ENST00000384254 I6L893 689 aaPredicted RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 MAP2K7O14733 419 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 TIMM23O14925 209 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 SPRY3O43610 288 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 ZIC3O60481 467 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 EGFP01133 1207 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 TUBBP07437 444 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 HNRNPH1P31943 449 aaKnown RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 EIF2S3P41091 472 aaKnown RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 MSH2P43246 934 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 CSNK2A1P68400 391 aaPredicted RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 ROR2Q01974 943 aaKnown RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 FOXM1Q08050 763 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 AIMP1Q12904 312 aaKnown RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 CDC16Q13042 620 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 MAD2L1Q13257 205 aaPredicted RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 TNFAIP1Q13829 316 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 KLF9Q13886 244 aaPredicted RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 CTTNQ14247 550 aaKnown RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 ETFDHQ16134 617 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 EIF2S3LQ2VIR3 472 aaKnown RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 ZNF805Q5CZA5 627 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 IGSF11Q5DX21 431 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 RARS2Q5T160 578 aaKnown RBP5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 ANKRD54Q6NXT1 300 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 PDXDC1Q6P996 788 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 B3GNT6Q6ZMB0 384 aa5.45□□□□□ -1.54
RNU6-40P-201ENST00000384254 CCDC190Q86UF4 302 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms