RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 CRYL1Q9Y2S2 319 aa13.54□□□□□ -0.24
SEC13-203ENST00000383801 CAPN7Q9Y6W3 813 aa13.54□□□□□ -0.24
SEC13-203ENST00000383801 OR51F1A6NGY5 319 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 AGAP14A8MT82 685 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 TK2O00142 265 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 ITM2AO43736 263 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 DLX3O60479 287 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 VPS26AO75436 327 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 IPO13O94829 963 aaKnown RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 NFATC1O95644 943 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 TPBGLP0DKB5 382 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 ZNF37AP17032 561 aaPredicted RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 ZNF7P17097 686 aaPredicted RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 AQP5P55064 265 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 NTHL1P78549 312 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 DLG1Q12959 904 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 SEMA3AQ14563 771 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 DHCR24Q15392 516 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 ISCA2Q86U28 154 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 RIN3Q8TB24 985 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 BPIFB1Q8TDL5 484 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 PDLIM5Q96HC4 596 aaKnown RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 FAR2Q96K12 515 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 ZSWIM3Q96MP5 696 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 NDNQ99608 321 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 CDH19Q9H159 772 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 ECT2Q9H8V3 914 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 RAD18Q9NS91 495 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 POLR3BQ9NW08 1133 aaPredicted RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 THG1LQ9NWX6 298 aaKnown RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
SEC13-203ENST00000383801 FKBPLQ9UIM3 349 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 GBF1Q92538 1859 aa13.53□□□□□ -0.24
SEC13-203ENST00000383801 TRBV5-4A0A0C4DH59 114 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 BUD23O43709 281 aaKnown RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 CISD3P0C7P0 127 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 ADH5P11766 374 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 CD1DP15813 335 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 ZNF30P17039 623 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 HNF1BP35680 557 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 MAGEA10P43363 369 aaPredicted RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 LIG3P49916 1009 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 RPL14P50914 215 aaKnown RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 CCNHP51946 323 aaPredicted RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 CDKN2DP55273 166 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 SF3A3Q12874 501 aaKnown RBP eCLIP13.52□□□□□ -0.258e-7■■□□□ 14.1
SEC13-203ENST00000383801 PTPRCAPQ14761 206 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 EML3Q32P44 896 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 ZRANB3Q5FWF4 1079 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 ASTLQ6HA08 431 aaPredicted RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 ASRGL1Q7L266 308 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 RBM23Q86U06 439 aaKnown RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 MICALL1Q8N3F8 863 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 RYBPQ8N488 228 aaPredicted RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 AFAP1L2Q8N4X5 818 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 STAG3L4Q8TBR4 150 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 SMARCD2Q92925 531 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 KLHL29Q96CT2 875 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 THOC1Q96FV9 657 aaKnown RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 RPL10LQ96L21 214 aaKnown RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 ASB16Q96NS5 453 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 BIRC8Q96P09 236 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 PLEKHG4BQ96PX9 1271 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 HEPHQ9BQS7 1158 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 ARHGEF3Q9NR81 526 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 KLHL42Q9P2K6 505 aa13.52□□□□□ -0.25
SEC13-203ENST00000383801 OAS3Q9Y6K5 1087 aaKnown RBP13.52□□□□□ -0.25
SEC13-203ENST00000383801 DOCK6Q96HP0 2047 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 C1orf232A0A0U1RR37 186 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 RGSL1A5PLK6 1076 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 SYCE1LA8MT33 242 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 ANKRD65E5RJM6 399 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 CCL22O00626 93 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 PRMT5O14744 637 aaPredicted RBP13.51□□□□□ -0.25
SEC13-203ENST00000383801 SMIM24O75264 130 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 RHOBTB1O94844 696 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 CYP2A6P11509 494 aaPredicted RBP13.51□□□□□ -0.25
SEC13-203ENST00000383801 ITGALP20701 1170 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 IMPDH1P20839 514 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 CALB2P22676 271 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 FSHRP23945 695 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 SERPINB3P29508 390 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 SPAM1P38567 509 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 GLRBP48167 497 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 DGKGP49619 791 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 NUMBP49757 651 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 NAGLUP54802 743 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 NCALDP61601 193 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 ZNF460Q14592 562 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 EIF4HQ15056 248 aaKnown RBP13.51□□□□□ -0.25
SEC13-203ENST00000383801 PDGFRLQ15198 375 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 E2F5Q15329 346 aa13.51□□□□□ -0.25
SEC13-203ENST00000383801 CTC1Q2NKJ3 1217 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms