RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 ANKRD20A8PQ5CZ79 823 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 DENND2CQ68D51 928 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 ADAMTSL4Q6UY14 1074 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 Q6ZVL8 140 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 HSD11B1LQ7Z5J1 315 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 TECPR1Q7Z6L1 1165 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 PIH1D2Q8WWB5 315 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 AP2M1Q96CW1 435 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 SCARF2Q96GP6 870 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-202ENST00000381208 BTBD6Q96KE9 485 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 RBM22Q9NW64 420 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPAIN-202ENST00000381208 ZNHIT6Q9NWK9 470 aaKnown RBP12.95□□□□□ -0.34
RPAIN-202ENST00000381208 ANKRD36A6QL64 1941 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 SSU72P8A0A1W2PR75 194 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 GOLGA6CA6NDK9 693 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 GOLGA6BA6NDN3 693 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 RHPN2P1A8MT19 583 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 ZNF487B1APH4 448 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 K7ENP7 123 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CBFA2T2O43439 604 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 MFSD11O43934 449 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CPNE6O95741 557 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 TPM1P09493 284 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 GOLGA6DP0CG33 693 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CD82P27701 267 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 LRP8Q14114 963 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 ARHGAP40Q5TG30 622 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 KCTD16Q68DU8 428 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 NCBP2-AS2Q69YL0 99 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 INO80CQ6PI98 192 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-202ENST00000381208 ZNF438Q7Z4V0 828 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 B3GNT8Q7Z7M8 397 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 PIM3Q86V86 326 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 VSIG1Q86XK7 387 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 Q8N9G6 341 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-202ENST00000381208 ZDHHC1Q8WTX9 485 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 LYSMD1Q96S90 227 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 DEF6Q9H4E7 631 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 GOLGA6AQ9NYA3 693 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 SEPT10Q9P0V9 454 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 IFNKQ9P0W0 207 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 TAAR2Q9P1P5 351 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 ATXN7L1Q9ULK2 861 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-202ENST00000381208 SUFUQ9UMX1 484 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 LOXL2Q9Y4K0 774 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 RNF215Q9Y6U7 377 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 RGSL1A5PLK6 1076 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 HGSO14964 777 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CD48P09326 243 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 SLC5A2P31639 672 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CASP14P31944 242 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 GNPDA1P46926 289 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CFHR1Q03591 330 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CLN3Q13286 438 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 TRA2AQ13595 282 aaKnown RBP eCLIP12.94□□□□□ -0.34
RPAIN-202ENST00000381208 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 ZFYVE27Q5T4F4 411 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 TMEM164Q5U3C3 297 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 LRRC66Q68CR7 880 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 XKR5Q6UX68 686 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CCDC81Q6ZN84 652 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 JAMLQ86YT9 394 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 PELI3Q8N2H9 469 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 OR8K1Q8NGG5 319 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 EXD1Q8NHP7 514 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CCL4L1Q8NHW4 92 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 HDAC11Q96DB2 347 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 OR2M4Q96R27 311 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CCNL2Q96S94 520 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-202ENST00000381208 TDRD1Q9BXT4 1180 aaKnown RBP12.94□□□□□ -0.34
RPAIN-202ENST00000381208 FOXP3Q9BZS1 431 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 CPNE5Q9HCH3 593 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 NENFQ9UMX5 172 aa12.94□□□□□ -0.34
RPAIN-202ENST00000381208 COL6A6A6NMZ7 2263 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 LRP4O75096 1905 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 ARHGEF17Q96PE2 2063 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-202ENST00000381208 KIF26BQ2KJY2 2108 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 FGF1P05230 155 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 PDHA1P08559 390 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 CTPS1P17812 591 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 ADCY8P40145 1251 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 ARHGAP25P42331 645 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 STC1P52823 247 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 B4GALNT1Q00973 533 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 CTBSQ01459 385 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 PTSQ03393 145 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 SKOR2Q2VWA4 1001 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-202ENST00000381208 ZSCAN23Q3MJ62 389 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 TSPAN33Q86UF1 283 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 NRROSQ86YC3 692 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 SLITRK4Q8IW52 837 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 CCDC13Q8IYE1 715 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 COL27A1Q8IZC6 1860 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-202ENST00000381208 CCHCR1Q8TD31 782 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 ADGRE3Q9BY15 652 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 ABCG8Q9H221 673 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 PCDH9Q9HC56 1237 aa12.93□□□□□ -0.34
RPAIN-202ENST00000381208 SPATS2LQ9NUQ6 558 aaKnown RBP12.93□□□□□ -0.34
RPAIN-202ENST00000381208 VPS18Q9P253 973 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms